Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g01035 ATGCTTCTCTTACTCTTCTTTCTTCTCTCACCTTCTCTGGTTCTCTCTCTAAACCAGGAAGGTCTTTACCTCCAACGAGTCAAACTCGGATTCGACGACCCGGACCAAGTTCTCTCCAACTGGAACAACAGAGACGACACTCCATGCAAATGGTCTGGTATCACATGCGACTCAGTAACTCAGTCAGTCAACTCAGTTGACCTCTCCAACTCCAACCTCGCCGGTCCCTTCCCTACTCATCTCTGCCGTCTCCCCAATCTCTCCTTCATCTCTCTCTTAAACAACTCCATCAACTCATCTCTCCCCCTTGAAATCTCCACGTGTCAGAATCTCCAGTATCTCTACCTTGGCCAAAATCTCTTAGTGGGTACCCTTCCTTATACCCTTGCTTACATCCCAACTCTCCGCCACCTCGATGTCAACGGAAACAACTTCTCCGGCGATATCCCAGCCAGTTTCGGCGAATTCCAGCAACTCGAAGTGCTCTCTCTTATCGAAAATCTTCTCAACGGAACCATACCCTCATTTCTCGGAAATATTTCTACTCTCAAACACCTTAACCTCTCTTACAACCCTTTCACTCCGAGTCCAGTCCCCCCTGAACTCGGTAACTTAACGAATCTTGAATTCCTCTGGCTCACCGGTTGTAACCTCGTGGGTCAGATCCCGGACTCGCTCGGCAGGCTTAAAAAGCTGATTGATTTGGACTTGGCGATAAACAATCTTCACGGTCCGATTCCGAAATCATTCACCGAGCTTTCAAGTATTGTACAGATTGAGCTTTACAATAACTCGCTCACCGGCGAGCTTCCAGCCGGGTTATCTAATCTCACCACGTTGCGGAATTTCGATGCTGCAAGGAACGATTTGGAGGGATCGATCCCGGACGAGTTGTGCCGGTTACCGCTTGGATCACTCAATTTGTATGAGAATAGGTTTGAGGGAACTTTGCCGGCGAGCATCGCTCTGTCGCCGAATCTCTTCGAGCTGAGATTGTTCAATAATCGACTTACTGGAGAACTTCCGAGGGATCTTGGGAAGAATTCACCGTTGATATATATGGATGTTTCAGAAAATCTGTTGTCTGGTGAAATTCCGCCAAATTTGTGTGAAAAGGGTTTTTTACAAGAGCTTCTTATGATCTACAATTCCTTCTCCGGGCAGATCCCAGAGAGTCTCGGTAAATGTCGGAGTTTAACTAGAGTCCGATTGGGGAATAATCAGCTCTCCGGTGAGATTCCAGTTGAAATCTGGGGGCTCCCCAATATGTATTTGCTTGAGCTTCTGGGGAATTCGTTTTCTGGTGGGATATCGAAGATGATCTCCGGAGCGTCTAATCTCTCCGTCCTGTTGATATCGAAAAACCGGTTTACCGGAAATATACCAGATGAGATTGGTTTGGTTGACACTCTGGTTGAATTTTCCGCTAACGACAATCTACTTACTGGGCCGCTCCCGGCGACATTGGTGAATCTCACGCAGCTCGTAAGGCTTGATCTTCATACTAACGACCTTTTGGGCAAGCTTCCGTCGGGTATTCGATCCTTGGAGAAGCTCAATGAGCTGAACCTGGCCAATAATGGATTTTCAGGGGAAATCCCGGCAGAGCTTGGAAGCTTGCCAGTGCTTAATTATTTGGATCTCTCAGGGAATCTATTCTCTGGGAAAATTCCGCTCGAATTGCAGAATTTGAAGCTTAATCAATTCAATTTGTCGAACAATCGCCTTTCCGGGGACCTCCCTCCTTTGTACGCCAAGGAAATGTATCGGGATAGCTTCTTAGGCAATCCAGGCTTGTGTGGCGATCTGGCCGGTCTGTGTCCAAGCAGAGAAGAAGCCAAGAGCAGGGGTTTCATCTGGCTGCTTCGATCGATCTTTATACTTGCTGCGGTGGTGTTTATTGTTGGGGTGGTCTGGTTCTACATGAAGTACCGGAATTTCAAAACGGCGAAAAGGGGAATTGACAAATCGAAATGGATGTTGACATCGTTCCACAAGTTGGGTTTTAGTGAATATGAGATCTTGGATTGCCTCGACGAAGACAATGTGATCGGAAGCGGAGCTTCTGGGAAAGTCTATAAGGCTGTACTCAGCAATGGAGAAGCAGTTGCAGTGAAGAAGCTCTGGGGAGGATCAAAGAAAGGAGGTGAAAATGACGATGCGGAAAAGGGTCGGATACCTGATGATGGATTCAAAGCCGAAGTCGAAACCTTGGGAAAGATCCGGCATAAGAACATTGTCAAGTTATATTGTTGTTGCACTACTTGGGACTGCAAGCTTCTTGTCTATGAATACATGCCAAATGGGAGTTTGGGAGATTTGCTGCATAGTAGTAAAGGAGGCTTGTTGGACTGGCCAACAAGATATAAGATAGCAGTCGATGCCGCCGAGGGGCTCTCCTACTTGCACCATGACTGTGTCCCTCCAATTGTTCATCGCGATGTGAAATCAAACAACATCTTGTTGGATGGGGAGTTCGGCGCACGGGTGGCAGATTTCGGTGTCGCCAAGGTGGGCGAAGCGATGGGCATGGCGCCTAAATCCATGTCTGTGATAGCTGGTTCATGTGGTTACATTGCACCAGAGTATGCCTACACGCTTCGAGTGAATGAGAAGAGCGACATATACAGCTTTGGAGTGGTAATCCTAGAGCTGGTGACAGGAAGACTCCCCATTGACCCTGAGTTTGGGGAGAAGGACTTAGTGAAGTGGGTGTGCACAACTTTAGACCAGAAAGGTTTTGACGATGTGATCGATCCCAAGCTCGACGCCTGCTTCAAGGAAGATATTTGCCGGGTTCTCAACATTGGTCTCCTCTGCACTAGTCCTCTCCCCATTAACCGCCCTGCAATGCGAAGGGTGGTTAAGATGTTGCAAGAGGTGAGCACAGAGAACAAGCCCAAGACCGTGAATAAGGACGGAAAATTGTCCCCATATTACTATGAAGATGCCTCTGATCAGGGAAGCATAGTCTGA 2976 0.4772 MLLLLFFLLSPSLVLSLNQEGLYLQRVKLGFDDPDQVLSNWNNRDDTPCKWSGITCDSVTQSVNSVDLSNSNLAGPFPTHLCRLPNLSFISLLNNSINSSLPLEISTCQNLQYLYLGQNLLVGTLPYTLAYIPTLRHLDVNGNNFSGDIPASFGEFQQLEVLSLIENLLNGTIPSFLGNISTLKHLNLSYNPFTPSPVPPELGNLTNLEFLWLTGCNLVGQIPDSLGRLKKLIDLDLAINNLHGPIPKSFTELSSIVQIELYNNSLTGELPAGLSNLTTLRNFDAARNDLEGSIPDELCRLPLGSLNLYENRFEGTLPASIALSPNLFELRLFNNRLTGELPRDLGKNSPLIYMDVSENLLSGEIPPNLCEKGFLQELLMIYNSFSGQIPESLGKCRSLTRVRLGNNQLSGEIPVEIWGLPNMYLLELLGNSFSGGISKMISGASNLSVLLISKNRFTGNIPDEIGLVDTLVEFSANDNLLTGPLPATLVNLTQLVRLDLHTNDLLGKLPSGIRSLEKLNELNLANNGFSGEIPAELGSLPVLNYLDLSGNLFSGKIPLELQNLKLNQFNLSNNRLSGDLPPLYAKEMYRDSFLGNPGLCGDLAGLCPSREEAKSRGFIWLLRSIFILAAVVFIVGVVWFYMKYRNFKTAKRGIDKSKWMLTSFHKLGFSEYEILDCLDEDNVIGSGASGKVYKAVLSNGEAVAVKKLWGGSKKGGENDDAEKGRIPDDGFKAEVETLGKIRHKNIVKLYCCCTTWDCKLLVYEYMPNGSLGDLLHSSKGGLLDWPTRYKIAVDAAEGLSYLHHDCVPPIVHRDVKSNNILLDGEFGARVADFGVAKVGEAMGMAPKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVTGRLPIDPEFGEKDLVKWVCTTLDQKGFDDVIDPKLDACFKEDICRVLNIGLLCTSPLPINRPAMRRVVKMLQEVSTENKPKTVNKDGKLSPYYYEDASDQGSIV* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g01035 991 ProSiteProfiles Protein kinase domain profile. 678 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01035 991 FunFam Receptor-like protein kinase HSL1 662 765 - -
Eupl06g01035 991 SUPERFAMILY L domain-like 41 301 - -
Eupl06g01035 991 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 17 180 - -
Eupl06g01035 991 FunFam Receptor-like protein kinase HSL1 302 609 - -
Eupl06g01035 991 SUPERFAMILY RNI-like 211 572 - -
Eupl06g01035 991 Gene3D Ribonuclease Inhibitor 238 307 IPR032675 -
Eupl06g01035 991 Gene3D Ribonuclease Inhibitor 168 237 IPR032675 -
Eupl06g01035 991 Pfam Leucine rich repeat N-terminal domain 18 57 IPR013210 -
Eupl06g01035 991 Gene3D Transferase(Phosphotransferase) domain 1 766 984 - -
Eupl06g01035 991 SMART serkin_6 678 944 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01035 991 Gene3D Phosphorylase Kinase; domain 1 661 765 - -
Eupl06g01035 991 ProSitePatterns Protein kinases ATP-binding region signature. 684 707 IPR017441 GO:0005524
Eupl06g01035 991 Pfam Leucine rich repeat 133 192 IPR001611 GO:0005515
Eupl06g01035 991 Pfam Protein kinase domain 680 896 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g01035 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Eupl06g01035 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 766 975 - -
Eupl06g01035 991 Gene3D Ribonuclease Inhibitor 308 610 IPR032675 -
Eupl06g01035 991 SUPERFAMILY Protein kinase-like (PK-like) 669 958 IPR011009 -
Eupl06g01035 991 FunFam Leucine-rich receptor-like protein kinase family protein 198 296 - -
Eupl06g01035 991 Gene3D Ribonuclease Inhibitor 16 167 IPR032675 -
Eupl06g01035 991 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 379 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g01035 Eupl-Chr6 17026660 17030699 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g01035 14 991 Receptor kinase-like Gene Family AT1G28440 69.746 0.0 1390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Eupl06g01035 Pkinase 7.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g01035 - - nnu:104589089 1537.32