Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00999 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCGGTTGGGATGATGGCCCTTCATGAGGCCCTCAGGAGCGTCTGTCTCAATTCAGACTGGACTTACTCCGTCTTCTGGACCATTCGACCTCGCCCGAGAAGTAGAGGAGGTAATGGTTGCAAGGTCGGCGATGATAACGGCAGCTTGATGTTGATGTGGGAAGATGGGTTTTGCCGGGGAAGAGTAGCAGAGTGTCTGGAAGAGATGGATGGAGAGGATCCAGTCAGAAAGGCCTTCAGCAAGATGTCCATTCAGTTGTACAATTATGGAGAAGGATTGATGGGAAAGGTAGCTTCTGATAAGTGTCATAAATGGGTTTTCAAGGAACCTTCTGAATGTGAACCCAATATCTCCAACTACTGGCAGAGCTCATTTGATGCTCTTCCTCCTGAATGGACTGATCAGTTTAACTCGGGTATTCAGACCATAGCTGTTATTCAAGCTGGCCATGGCCTTCTACAGCTGGGTTCCTGCAAGATTATACCTGAAGACCTGCACTTCGTGCTCAGGATGAGACATACCTTTGAATCTCTTGGTTACCAATCTGGCTTCTATCTCTCCCAGCTCTTTTCTTCAAACAGGAATAATTCTCCTTCCTCCGCTCCTTCTTCGAAGCAATCTAATGCCCCGAGCCGCCCCCCTGCTCCTATCTTCAATTGGAGCCAAAGGCCGCTCCCTTCTGCGACTTCTGTTGTTACTTCTCCCAACTTTCAGAACTCCACTCGACTTGGATTACCGCAGACCAAAGATGAAACCCATCTCTTTCTCCTTCCCCATTCGTCTGATACCCAAATGGAAGACATGATGGCCGATCACGACTCTGACATAAAATGGCCAAATGGGTTGTCTTTTTTTAATGCTCTCACTGGACGGATGGACGATGCCAAGCTTCTATTTGGGACTGAGGGCTTAGGAAACAAATCAAACCAACAACTCCACCCGCTTGTTCTTGGAGGGAAGAATTCAAATTCGGCCATTAATCTTTGTGGCAAGGCCGATGAGTCTAAGGCCATCTCAGAAGCTTCGAATTCACTGAGCCAACATGGTAACAGAAGTGACAACAACGCTGGTAGCGCAAATGCCAATGACTACTTGAGCTTGGAGAGCCATTCGAACAATGTCAGGAAGATGGAGAACAAATTCAAGAGGAGTTTCACATTGCCTGCTAGAATGGCTTCTTCATCTTCTTCATCTTCTCTGGACCACCATCAACACCACCCGGTCGACTATAGGAGCACTGAAGCTGGTATTTACTCTGATATCATGGAGACCTTCTTAGAGTAA 1320 0.4742 MVGSGASDRSKEAVGMMALHEALRSVCLNSDWTYSVFWTIRPRPRSRGGNGCKVGDDNGSLMLMWEDGFCRGRVAECLEEMDGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPSECEPNISNYWQSSFDALPPEWTDQFNSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSNRNNSPSSAPSSKQSNAPSRPPAPIFNWSQRPLPSATSVVTSPNFQNSTRLGLPQTKDETHLFLLPHSSDTQMEDMMADHDSDIKWPNGLSFFNALTGRMDDAKLLFGTEGLGNKSNQQLHPLVLGGKNSNSAINLCGKADESKAISEASNSLSQHGNRSDNNAGSANANDYLSLESHSNNVRKMENKFKRSFTLPARMASSSSSSSLDHHQHHPVDYRSTEAGIYSDIMETFLE* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00999 439 PANTHER GB|AAF34833.1 1 439 IPR044170 -
Eupl06g00999 439 MobiDBLite consensus disorder prediction 207 263 - -
Eupl06g00999 439 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 84 187 IPR025610 -
Eupl06g00999 439 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 76 IPR025610 -
Eupl06g00999 439 MobiDBLite consensus disorder prediction 351 374 - -
Eupl06g00999 439 MobiDBLite consensus disorder prediction 234 259 - -
Eupl06g00999 439 MobiDBLite consensus disorder prediction 207 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00999 Eupl-Chr6 16284072 16287053 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00999 20 209 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 33.333 3.87e-21 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00999 - - nnu:104599441 769.229