Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00992 ATGGGTGAGCCATCTTCCGCTTACAAGGAATATGCAGCAGGTCTGGCTGCCGGAGTCGCCACGGTCATCATCGGTCATCCCTTCGACACTGTTAAGGTGAAGCTGCAAAAACACAATACTGGAGCACATGGAATAAAGTACAGGAATGCTTTGCATTGCACCGGTAGAATTCTAAAGAATGAAGGAGTGAAAGGACTGTACCGAGGTGCAACATCTTCTTTTGTTGGGATGGCATTCGAAAGTTCAATTCTTTTCGGCATTTATTCCCAAACAAAACAGCTACTTCAGGGAGAAGTGCAGAGTAGTAGACCACAGCTTCAGGTCGTCATTCCTTCAGCAGCTTATGGTGGAGCTATAATCAGTTTCATACTATGTCCATCAGAGCTGGTGAAATGTAGGATGCAAGTTCAAGGGACTGACTCGCTTGTTCCGAGGAACAATAGATACAGTAGTCCTCTTGATTGTGCTATTAAAACCATAAAGAATGAAGGGGTTAAGGGTATATTTCGTGGAGGTTTTGCAACTTTATTAAGAGAATCTTTCGGGAATGCAGTCTTCTTTAGCACTTATGAGTATAGCCGTTACTACATGCAATTGCAACTAAATGCTGCTTTATCTGACCATAGCAACCAACCAAAGGTATTGATTGATATGGGTATTGGCGTAATCAGTGGTGGGCTTGCTGGTATAGCTTTCTGGTCAACGGTTCTGCCCTTGGATGTGGCAAAAACTGTTATTCAGACTGCCCCAGACACAAGTTCTAGTAGAAATCCTTTTCAGACACTGGGCTTGATATACAAGAAAGCAGGATTTAGAGGATGTTATGCGGGTTTGGGTCCCACATTAGTGAGAGCATTTCCTGCGAATGCAGCTGCAATTGTCACTTGGGAACTTGCCTTGAAGTTTCTAGGGATCCGACATGACTAA 927 0.438 MGEPSSAYKEYAAGLAAGVATVIIGHPFDTVKVKLQKHNTGAHGIKYRNALHCTGRILKNEGVKGLYRGATSSFVGMAFESSILFGIYSQTKQLLQGEVQSSRPQLQVVIPSAAYGGAIISFILCPSELVKCRMQVQGTDSLVPRNNRYSSPLDCAIKTIKNEGVKGIFRGGFATLLRESFGNAVFFSTYEYSRYYMQLQLNAALSDHSNQPKVLIDMGIGVISGGLAGIAFWSTVLPLDVAKTVIQTAPDTSSSRNPFQTLGLIYKKAGFRGCYAGLGPTLVRAFPANAAAIVTWELALKFLGIRHD* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00992 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Eupl06g00992 308 FunFam Mitochondrial carrier protein 1 108 - -
Eupl06g00992 308 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 3 303 - -
Eupl06g00992 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 104 196 IPR018108 -
Eupl06g00992 308 ProSiteProfiles Solute carrier (Solcar) repeat profile. 216 302 IPR018108 -
Eupl06g00992 308 Pfam Mitochondrial carrier protein 112 196 IPR018108 -
Eupl06g00992 308 Pfam Mitochondrial carrier protein 5 97 IPR018108 -
Eupl06g00992 308 Pfam Mitochondrial carrier protein 222 303 IPR018108 -
Eupl06g00992 308 SUPERFAMILY Mitochondrial carrier 4 297 IPR023395 -
Eupl06g00992 308 Gene3D Mitochondrial carrier domain 112 307 IPR023395 -
Eupl06g00992 308 Gene3D Mitochondrial carrier domain 2 111 IPR023395 -
Eupl06g00992 308 FunFam Mitochondrial amino acid carrier 179 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00992 Eupl-Chr6 16178839 16187377 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00992 25 303 Antiporters AT1G79900 28.521 2.62e-30 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00992 K15109 - msin:131241105 495.352