Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00991 ATGGAGAATTTCAATAGAACCGAAGAGGAGAAACGGATCTTGAAGACGAAGGCGAAGAAGGAGATAGTAGACGAAGATGATGATGCAGAAGAGGAAGAAGAAGAGAAGAAGAAGATCGTTGTTGTTTCTGGAGTGTCTGCTAGAAAAGGTTCCAGTAGCGGTGGAGGAGGAGTTTCGTCGCCTTGTTGTCAAGCGGAGAAGTGTACGGCTGATCTTACTGACGCCAAACGCTACCACCGTCGGCATAAGGTTTGTGAGTATCACTCCAAAGCTCCGGTTGTTGTTGTTTTAGGGCTCCGCCAGAGATTCTGTCAGCAATGCAGCAGGTTCCATGAGCTATCGGAGTTTGACGAATCGAAGAGGAGTTGTCGTAGGCGTTTGGCTGGACACAATGAGCGGCGCAGGAAGAACTCTTCTGAATCTCATGGAGAGGGCTCGAGCCGCAAAGGTGCTGGCCCACAGTTGAAGGAAAATCATTGCAGGCAAGCTGACCAAAGTGGGAGAATGCCGATAACCCTCCCAGGAAATGCCACTTACAAACATTTCCAGATCAGATAA 558 0.4892 MENFNRTEEEKRILKTKAKKEIVDEDDDAEEEEEEKKKIVVVSGVSARKGSSSGGGGVSSPCCQAEKCTADLTDAKRYHRRHKVCEYHSKAPVVVVLGLRQRFCQQCSRFHELSEFDESKRSCRRRLAGHNERRRKNSSESHGEGSSRKGAGPQLKENHCRQADQSGRMPITLPGNATYKHFQIR* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00991 185 Coils Coil 15 35 - -
Eupl06g00991 185 ProSiteProfiles Zinc finger SBP-type profile. 60 137 IPR004333 GO:0003677
Eupl06g00991 185 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 46 154 IPR044817 GO:0003677
Eupl06g00991 185 Pfam SBP domain 63 136 IPR004333 GO:0003677
Eupl06g00991 185 SUPERFAMILY SBT domain 61 140 IPR036893 GO:0003677|GO:0005634
Eupl06g00991 185 MobiDBLite consensus disorder prediction 127 185 - -
Eupl06g00991 185 Gene3D - 53 124 IPR036893 GO:0003677|GO:0005634
Eupl06g00991 185 FunFam Squamosa promoter-binding-like protein 14 54 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00991 Eupl-Chr6 16170551 16173277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00991 58 185 SBP-box Gene Family AT3G15270 58.915 1.98e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Eupl06g00991 SBP 8.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00991 - - nnu:104608184 245.358