Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00987 ATGGTGATGCTCGAGTTTGTTCCAATGACTTTCCTCAAATGGGTTTTTATGGTTTCTTTTATTTGTTCATCTCTGGGTCTTGAAACCCTGAACCAGAGCTGTGATCCAAATGACTTGTTGGCATTAAAGGAATTTGCACGGAACTTTACGAACGAGTGGATTATCTCGGCGTGGTCCGATGAATCTGCTTGCTGTCAATGGGATGGTGTTGTCTGCGAGAATGGGAATAATGGGTCGGTTGGGAGTAGAGTGATCAGGTTGATTCTGCCTGGTAGAGGTCTGAAAGGGAGGATATCGCATTCGTTGGGTGGTCTAGATCAGCTGAAATTGCTGAACCTTTCGCTCAATCTTCTGGAAGGTGGAGTTCCCATGGAGCTCTCGAACTTGAAGCAGCTGGAGGTTCTTGATCTCAGCTATAACATGCTATCAGGACCGATTTTGGGGGCACTAGGTGGTTTGAAATCCATCCAGTTAGTTAATATCTCTAGCAATTCCTTTGATGGGGATTTCCCCGAACTTGGTTCTTTTCCGAATCTTGCTGTCTTCAATATAAGCAACAATTCTTTCACCGGCCGGGTCGATACTAAAATCTGCAGTGTCTCAAATGCGATTCGGATTCTGGATTTATCGATGAACCAGTTCTCTGGAGGGCTCTTGGAAGAAGGTTTAGCCAATTGCAGTACATCTCTCCAACAATTGCACGTACAATCCAATTCGCTTTCGGGCCATCTTCCAGACACGCTGTTTTGGATGTCATCTTTGGAGCAGCTATCGATCTCCACCAACAATTTCTCCGGTCAGTTGAGCAAGAGACTAAGTAAGCTCTCTAGCCTCAAAACTTTACTTATTTTTGGAAACCGATTCTTGGGTTCCCTTCCGAATGTGTTTGGAAACCTTACAGAACTAGAACAGTTGATTGCACACTCGAATTCCTTCTCTGGGCAATTGCCCCATTCTCTGGCACTATGCTCAATGCTTCAGGTGCTCGACCTTCGGAACAATTCTCTAACGGGGGTTGTTGATCTTGATTTCACTGGAATGCCCCATCTCATTTCACTTGATCTTGCCACTAATCATTTCACGGGTCACCTTCCCACTACCCTATCCAGTTGTCGGGAATTGAAAACCTTAAGCCTTGCTAAGAACGACTTTTCTGGCCGTGTCCCCGAAGATTTTGCAAACCTCACATCCCTTTCCTTTCTCTCACTGTCGAACAACAGCTTCGATACCTTAACAGGGACATTAGGTGTATTGCAGCAGTGCAGAAATCTCACCACTCTTATCCTTACCAAGAATTTCCATGGAGAAGAAATTCCAAATAATGTTAGTGGGTTTGAGAACTTGATGATCCTTGCGGTTGGAAACTGTGCTCTTACCGGCCAAATCCCCAAGTGGCTATTGAATTGCAAGAAGTTACAGGTTCTTGATTTGTCATGGAATCACTTGAGTGGTGGCATCCCTCCCTGGATTGGTCAGATGGAGAATCTGTTTTACTTGGACATTTCAAATAATTCTCTGACTGGAGAGATCCCAAAAAGCTTGACAGACCTAAAGAGCCTCATTTCCTCAAACAGTTGTATACCAGGGGTTACCACCTCTGTTGGCATACCGTTGTATGTAAAACGTAACCAGAGTGCCAATGGTCTGCAATACAACCAGGCCTCAAGTTTCCCTCCATCATTATACTTGAGCAACAATTGGATTAATGGGACCATATGGCCTGAGATTGGGCGGTTGAAGGGGCTCCATGTCTTAGATTTGAGCAGGAACAACATCACTGGGACCATCCCAGAGACCATATCGGATATGGAGAACTTGGAAATCTTGGATCTATCGTGCAATGATCTCAATGGGTCGATCCCCTGGTCATTTAACAAGCTCACATTCCTATCAAAGTTTAGTGTGGCAAATAATCACTTGGAAGGAGATATTCCAACTGGGGGGCAGTTCTCCAGCTTCCCCAACTCAAGTTTCGAGGGGAATCCGAGATTGTGTGGTGCACTTCGTCCTCCTTGTGGTCTAGCTGACAATATGGGGCTGAAGCCTGAGATCCGATCTGCCTCGAATGGTAAGATTGGTCGAAGCAGCATCCTCGGGATAACAATCAGTATAGGAGTGGGGATTGCCTTGCTTTTGTCCATTGTCCTGCTTAACATGCCGAGGAAGGACATAGGAGATCCAATTCATGATGATGTAGAGGAGGAAATCTGCAGGCCGCACAGGTTATCGGAGGCAGTTGGGTCTTCAAAGTTAGTGCTTCTGTTTCAGAATTCAGATTGTAAGGAGCTAACCATTGGTGACCTGCTGAGATCTACAAACAATTTCGACCAGGCAAACATTATTGGTTGCGGAGGATTCGGTCTGGTGTACAAAGCCAACCTCCCCAACGGAACAAAGGCTGCAATCAAGAGGCTCTCTGGAGATTGTGGTCAGATGGAACGGGAGTTCCGGGCCGAAGTGGAAGCTCTCTCAAGAGCTCAGCACAAGAACCTTGTTCCTCTGCAAGGGTATTGCAAACATGGGAATGACAGATTGTTGATCTACTCTTACATGGAGAATGGGAGCTTGGATTATTGGCTGCATGAGACGGTTGATGGTGGATCAGTACTAAAATGGGATGCTAGGCTTAAGATAGCTCAGGGAGCAGGAAGGGGCCTGGCTTACTTGCATAAGGCCTGTGAACCAAATATTGTCCACCGGGACATAAAATCTAGCAACATTCTCTTGGATGAAAAATTTGAAGCTCATCTGGCAGATTTTGGTCTCTCCAGGCTCCTTCATCCTTATGATACCCATGTGACGACGGATCTGGTCGGGACCTTAGGATACATCCCTCCCGAATACGGCCAGACATTGACAGCTACTTTCAAAGGTGATGTTTACAGCTTTGGTGTTGTTCTTCTGGAGCTTCTTACTGGTAGGAGGCCTGTAGATGTGTGCAAAGCAAAAGGCTGCCGGGACTTGGTGTCTTGGGTACTTCAAATGAAATTCGAGAAGAAAGAGGAACAGATAATTGACTCATCAATCTGGAATAAGGTTCTGGAGAAGCAGCTCCTAGAGGTACTCAGAATTTCATGTAAATGCATAGACCAGGATCCGAGGCGTAGACCTTCCATTGAACAAGTTGTTTCATGGCTTGATGGTATTCGAGCTGATGATGCCTAG 3165 0.4578 MVMLEFVPMTFLKWVFMVSFICSSLGLETLNQSCDPNDLLALKEFARNFTNEWIISAWSDESACCQWDGVVCENGNNGSVGSRVIRLILPGRGLKGRISHSLGGLDQLKLLNLSLNLLEGGVPMELSNLKQLEVLDLSYNMLSGPILGALGGLKSIQLVNISSNSFDGDFPELGSFPNLAVFNISNNSFTGRVDTKICSVSNAIRILDLSMNQFSGGLLEEGLANCSTSLQQLHVQSNSLSGHLPDTLFWMSSLEQLSISTNNFSGQLSKRLSKLSSLKTLLIFGNRFLGSLPNVFGNLTELEQLIAHSNSFSGQLPHSLALCSMLQVLDLRNNSLTGVVDLDFTGMPHLISLDLATNHFTGHLPTTLSSCRELKTLSLAKNDFSGRVPEDFANLTSLSFLSLSNNSFDTLTGTLGVLQQCRNLTTLILTKNFHGEEIPNNVSGFENLMILAVGNCALTGQIPKWLLNCKKLQVLDLSWNHLSGGIPPWIGQMENLFYLDISNNSLTGEIPKSLTDLKSLISSNSCIPGVTTSVGIPLYVKRNQSANGLQYNQASSFPPSLYLSNNWINGTIWPEIGRLKGLHVLDLSRNNITGTIPETISDMENLEILDLSCNDLNGSIPWSFNKLTFLSKFSVANNHLEGDIPTGGQFSSFPNSSFEGNPRLCGALRPPCGLADNMGLKPEIRSASNGKIGRSSILGITISIGVGIALLLSIVLLNMPRKDIGDPIHDDVEEEICRPHRLSEAVGSSKLVLLFQNSDCKELTIGDLLRSTNNFDQANIIGCGGFGLVYKANLPNGTKAAIKRLSGDCGQMEREFRAEVEALSRAQHKNLVPLQGYCKHGNDRLLIYSYMENGSLDYWLHETVDGGSVLKWDARLKIAQGAGRGLAYLHKACEPNIVHRDIKSSNILLDEKFEAHLADFGLSRLLHPYDTHVTTDLVGTLGYIPPEYGQTLTATFKGDVYSFGVVLLELLTGRRPVDVCKAKGCRDLVSWVLQMKFEKKEEQIIDSSIWNKVLEKQLLEVLRISCKCIDQDPRRRPSIEQVVSWLDGIRADDA* 1055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00987 1054 SUPERFAMILY L domain-like 63 317 - -
Eupl06g00987 1054 Pfam Leucine Rich Repeat 495 514 IPR001611 GO:0005515
Eupl06g00987 1054 Pfam Leucine Rich Repeat 471 490 IPR001611 GO:0005515
Eupl06g00987 1054 Gene3D Phosphorylase Kinase; domain 1 741 850 - -
Eupl06g00987 1054 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 245 340 - -
Eupl06g00987 1054 FunFam Leucine-rich repeat receptor-like protein kinase 851 1054 - -
Eupl06g00987 1054 CDD STKc_IRAK 781 1049 - -
Eupl06g00987 1054 SUPERFAMILY Protein kinase-like (PK-like) 757 1046 IPR011009 -
Eupl06g00987 1054 Pfam Leucine rich repeat 581 640 IPR001611 GO:0005515
Eupl06g00987 1054 Pfam Leucine rich repeat 326 384 IPR001611 GO:0005515
Eupl06g00987 1054 Gene3D Ribonuclease Inhibitor 373 675 IPR032675 -
Eupl06g00987 1054 SMART LRR_typ_2 469 493 IPR003591 -
Eupl06g00987 1054 SMART LRR_typ_2 579 602 IPR003591 -
Eupl06g00987 1054 SMART LRR_typ_2 347 371 IPR003591 -
Eupl06g00987 1054 SMART LRR_typ_2 603 626 IPR003591 -
Eupl06g00987 1054 SMART LRR_typ_2 129 152 IPR003591 -
Eupl06g00987 1054 SMART LRR_typ_2 228 251 IPR003591 -
Eupl06g00987 1054 SMART LRR_typ_2 395 418 IPR003591 -
Eupl06g00987 1054 SMART LRR_typ_2 275 298 IPR003591 -
Eupl06g00987 1054 SMART LRR_typ_2 322 346 IPR003591 -
Eupl06g00987 1054 PANTHER LEUCINE RICH REPEAT KINASE 2 82 218 - -
Eupl06g00987 1054 FunFam Leucine-rich repeat receptor-like kinase 38 148 - -
Eupl06g00987 1054 FunFam Phytosulfokine receptor 1 737 850 - -
Eupl06g00987 1054 ProSitePatterns Protein kinases ATP-binding region signature. 781 803 IPR017441 GO:0005524
Eupl06g00987 1054 Gene3D Ribonuclease Inhibitor 33 267 IPR032675 -
Eupl06g00987 1054 FunFam Tyrosine-sulfated glycopeptide receptor 1 344 677 - -
Eupl06g00987 1054 Pfam Leucine rich repeat N-terminal domain 36 72 IPR013210 -
Eupl06g00987 1054 SMART serkin_6 775 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00987 1054 Pfam Protein kinase domain 777 1044 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00987 1054 SUPERFAMILY L domain-like 270 662 - -
Eupl06g00987 1054 Gene3D Ribonuclease Inhibitor 268 366 IPR032675 -
Eupl06g00987 1054 ProSiteProfiles Protein kinase domain profile. 775 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00987 1054 ProSitePatterns Serine/Threonine protein kinases active-site signature. 897 909 IPR008271 GO:0004672|GO:0006468
Eupl06g00987 1054 Gene3D Transferase(Phosphotransferase) domain 1 851 1052 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00987 Eupl-Chr6 16118181 16122430 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00987 39 1052 Receptor kinase-like Gene Family AT1G55610 34.250 1.81e-172 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Eupl06g00987 Pkinase 1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00987 - - nnu:104608190 1624.76