Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00984 ATGGCATGGTATAGTTATGCACATGGGATGGCATGTGGATGGGAAGAAATCCCAGACGGGTCCCCTCCCCCTCCTCCTCCTCCTCCTTCATACCAACATTTCGAGTCACAGAGCTTTACGTCAACTTCTTACCCACAAAATGAATCTCAGTTTTACCCACTTGTTTTCTCTTCTGATTATGTTGGTCCATCTATATTTCCTGTGTTTCCTTTGATGGTTGAGCAAAATGGAGTCGATAATGGACTTCCCATGAGTTCTTTAATGGGGGGTAATTTCTTTGATGGGTTTTACCCAGAAAAACAAATTAGTGAAGATAGAGTGGAGAATTCTTCATCAAAGCGATGGGAATCATCGATAACGAAGGCTGCTAGAAGCAAGAGAAGGATGGCTAGGCGAATCAGCTCCAACTCTTCTTCTAGGCTTGGCCATTTGTTTAGTACTTCTCCTAGCTCTTCTTCTAGTCGGTCTAATAGCAGAAAACCTTCATTGTCTTCTGCAACTCACCCCAACAACAACAATAACAAAGACATCATCACATTTATCACTCCTGATGACAAAAAACTCAAGTTCTTGTTGCAGAAGGAGTTGAGGAACAGTGATGTGAACTCCCTAGGAAGGATTGTTCTCCCAAAGAAGGATTCAGAGGCAAATCTACCATGCCTCACAGTTAAGGAAGGGATCCAAGTCACAATCAGAGATGTGGGTTCTACCAAGGTGTGGTACATGAGGTACAGATATTGGCCTAACAATAAGAGCAGAATGTATGTATTGGAGAATACAGGAGATTTTGTAAAGCAGAATGGACTTCAAAGTGGAGACTTTGTCATCTTGTACCAAGATGAAAACCAACAGCTTTACATCTCCGCGAAAAAGGCCGAAAAACCATCTGTTACACCTCTAGAGGAAGAAAAAAAGGAAGAAGAAGATGAACCCTTGACATTTCTGAAGACAGAAATGAAAGAGGACATGGTAGAGGAAGATGATGAATGGCAGGTCACCATGCCATCTGATAGTACTTCAGACAAGAAGTTCAACGAAGTTGGTAACAGTTCTTACAACATAGGTGCTGCTGAACCTTCAAACCAACAGGCCACGGACAATGCCACGGAGCAGACAATGGAAATCGATGAACCGTCGTGTTCTAAGGATATAGTAATGGAGGGAAATGTTCAACACCTTGATGGTTTGAATGCTATCGACTTCGATGAATGCGACTTCAGTGAACTAGAAAGGCTTCCAAATATAAATGATATTGATCTTTCTCTCTATGATGAACTGGTGATGGACCTTGATGATGATTAG 1302 0.4201 MAWYSYAHGMACGWEEIPDGSPPPPPPPPSYQHFESQSFTSTSYPQNESQFYPLVFSSDYVGPSIFPVFPLMVEQNGVDNGLPMSSLMGGNFFDGFYPEKQISEDRVENSSSKRWESSITKAARSKRRMARRISSNSSSRLGHLFSTSPSSSSSRSNSRKPSLSSATHPNNNNNKDIITFITPDDKKLKFLLQKELRNSDVNSLGRIVLPKKDSEANLPCLTVKEGIQVTIRDVGSTKVWYMRYRYWPNNKSRMYVLENTGDFVKQNGLQSGDFVILYQDENQQLYISAKKAEKPSVTPLEEEKKEEEDEPLTFLKTEMKEDMVEEDDEWQVTMPSDSTSDKKFNEVGNSSYNIGAAEPSNQQATDNATEQTMEIDEPSCSKDIVMEGNVQHLDGLNAIDFDECDFSELERLPNINDIDLSLYDELVMDLDDD* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00984 433 MobiDBLite consensus disorder prediction 17 42 - -
Eupl06g00984 433 ProSiteProfiles B3 DNA-binding domain profile. 192 293 IPR003340 GO:0003677
Eupl06g00984 433 Gene3D - 180 302 IPR015300 -
Eupl06g00984 433 SMART B3_2 192 293 IPR003340 GO:0003677
Eupl06g00984 433 MobiDBLite consensus disorder prediction 104 178 - -
Eupl06g00984 433 MobiDBLite consensus disorder prediction 18 32 - -
Eupl06g00984 433 MobiDBLite consensus disorder prediction 134 178 - -
Eupl06g00984 433 Pfam B3 DNA binding domain 193 288 IPR003340 GO:0003677
Eupl06g00984 433 CDD B3_DNA 190 281 IPR003340 GO:0003677
Eupl06g00984 433 SUPERFAMILY DNA-binding pseudobarrel domain 191 287 IPR015300 -
Eupl06g00984 433 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 109 334 IPR044800 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00984 Eupl-Chr6 16071060 16074908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00984 182 288 B3 DNA Binding Superfamily AT1G28300 63.551 3.67e-41 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl06g00984 B3 1.1e-15 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00984 K09287 - nnu:104608193 296.589