Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00983 ATGGCTGCCTCTGCAACTGCTCTATCTTCCTTCTCATCTATCTCCATCCCTAAATCCCATCCTCCCACCTTCTTCAAACTATCCTCAAGGTCCATCCCCACCATAAACTTCTCCTTCTCAAACAGCAAAATCCACAAACCTACCAAAACAACCTCTTCGCTCTCCTTCCCCTCAAAGCCCCACAAAACCAAACCCATTAAAGTCCAGTCCAACGACATCGACACCACCTTCTTCGACGAAGTAAACCCAGAAGGAGATTACACCTTCGAACCACCCACCCCTCCAGAAGGCTACGTTCCTCCTCCCTCCTTCGATGAGGGCCCACAGGAGACCGAAGATGAAATCGCAGCCGCTTACGAGGAAATCTATGGCCCGGCTTATAGTGGGGTCAGCGTGCTCGGTAAAGACATTTATGTGATGGATGCTAAAATGAAGAAGGCGACTGGGTTTGGGTCGAAGACGAAGAAGGAGAAGATTAGGGACGGGTTTGAGGAACGGGTGGTGCAGGTGAGGAGGGTGACTAAGGTGGTTAAGGGTGGGAAGCAGTTGCATTTCAGGGCTGTTGTCGTTGTGGGCGATAAGCAGGGGCAGGTGGGTGTTGGTGTTGGGAAAGCTAAGGAGGTTATTGCAGCAGTTCAGAAGTCGGCGACGAATGCCAGGAGGAATATCATTACGGTGCCCATGACCAAGTACATGACATTTCCTCACAGATCTGATGGAGATTATGGGGCAGCAAAGGTGATGCTGAGACCTGCTTCACCCGGTACTGGTGTGATTGCTGGAGGTGCCGTGAGGATCGTTCTAGAAATGGCAGGTGTTGAGAATGCTTTGGGGAAACAAATTAGGAGTAAAAATGCTCTCAACAATGCTAGAGCGACAGTTGTTGCAGTCCAGAAAATGAGACAATTCCGTGATGTTGCTAGCGAGCGTGGGATCCCCATGGAAGAGCTATGGAAGTGA 960 0.5031 MAASATALSSFSSISIPKSHPPTFFKLSSRSIPTINFSFSNSKIHKPTKTTSSLSFPSKPHKTKPIKVQSNDIDTTFFDEVNPEGDYTFEPPTPPEGYVPPPSFDEGPQETEDEIAAAYEEIYGPAYSGVSVLGKDIYVMDAKMKKATGFGSKTKKEKIRDGFEERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNIITVPMTKYMTFPHRSDGDYGAAKVMLRPASPGTGVIAGGAVRIVLEMAGVENALGKQIRSKNALNNARATVVAVQKMRQFRDVASERGIPMEELWK* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00983 319 MobiDBLite consensus disorder prediction 45 66 - -
Eupl06g00983 319 MobiDBLite consensus disorder prediction 45 59 - -
Eupl06g00983 319 NCBIfam 30S ribosomal protein S5 162 316 IPR005712 GO:0003735|GO:0006412|GO:0015935
Eupl06g00983 319 MobiDBLite consensus disorder prediction 1 21 - -
Eupl06g00983 319 Pfam Ribosomal protein S5, C-terminal domain 240 310 IPR005324 GO:0003735|GO:0005840|GO:0006412
Eupl06g00983 319 SUPERFAMILY dsRNA-binding domain-like 159 228 - -
Eupl06g00983 319 Hamap 30S ribosomal protein S5 [rpsE]. 144 316 IPR005712 GO:0003735|GO:0006412|GO:0015935
Eupl06g00983 319 SUPERFAMILY Ribosomal protein S5 domain 2-like 233 311 IPR020568 -
Eupl06g00983 319 PANTHER RIBOSOMAL S SUBUNIT 152 318 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Eupl06g00983 319 Gene3D - 230 318 IPR014721 -
Eupl06g00983 319 ProSiteProfiles S5 double stranded RNA-binding domain profile. 163 226 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Eupl06g00983 319 FunFam 30S ribosomal protein S5 152 224 - -
Eupl06g00983 319 ProSitePatterns Ribosomal protein S5 signature. 180 212 IPR018192 -
Eupl06g00983 319 Pfam Ribosomal protein S5, N-terminal domain 163 227 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Eupl06g00983 319 FunFam 30S ribosomal protein S5 228 319 - -
Eupl06g00983 319 Gene3D - 159 224 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00983 163 303 Cytoplasmic Ribosomal Protein Gene Family AT2G41840 30.201 2.38e-13 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00983 K02988 - nnu:104599426 444.891