LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl06g00973	ATGGAGTGTACGAGATTTCTCAGCTTTTCGTTTGTGATCTTACTGGGTTTTCTCTGCTCATCTCAAGCTTATAATTTCTATGTTGGAGGGAAAGATGGGTGGGTTTTGAAACCATCTGAGAACTTCAACCAGTGGGCTCAGAGAAACAGGTTTCAAGTTAATGATTCTCTTGTTTTTAAGTATAAGAAAGGATCAGACTCTGTGTTGGTTGTAAACAAGGAAGACTACGATAAATGCAATACAGCGAAGCCCATAAAGAGTATGGTTGATGGAGATTCGGTGTTTAAGTTTGACAAGTCGGGTCCATTCTTCTTCATCAGTGGTAATCAGGGTAGTTGTGAGAAGGGTCAGAAGTTGATCGTCGTGGTTTTGTCTTTGAACCACAAGAGCCACCATGCACCTGCGCCTCACACGTCCAAAGCTCCACCTCCCAAAGCCCAAACACCGATGGCCCCACCGCCGAAGGCATTGACACCCATCTCACAACCTCCTAAAGCGATGACACCCGTGTCATCACCATCTCCAATTGCCTCCACACCGAAGTCATCTCCTCCAAAAGCCATGACACCCGCGGTTTCACCATCTCCAATGGCCTACTCACCGATGGCGTCTCCTCCAAAAGCCATGACACCCATATCGCCTTCACCGATGGCAAACACACCAGTGTGGTCTCCTACATATTCTCCTATTTCCAAAACACCGACGTCTTCTCCTTCACAATCTCCAATTGCCGTAACACCGACGTCGTCTCCTTCACCAGCTTTGACACCCATGTCGCCATCTCCGATGAGTTTGACACCGATGTCCTCTCCTCCGTCTCCACCTGTTGACACGCCAGTATCTTCTCCTGCAGCTGCTACGACACCCACGCCGAATTCTCCTACCAGTCCGACTACTGGTACTCCTTCAGATATTACTGCACCAGCACCAACTCGTTCCTCTTCTCATGCTCTCACCTCCTCTATTTCTTTGATCTCTCTTGTCGGCAGTTTGGTTTTGGGTAGTTTTGTTTGGTGA	1017	0.4818	MECTRFLSFSFVILLGFLCSSQAYNFYVGGKDGWVLKPSENFNQWAQRNRFQVNDSLVFKYKKGSDSVLVVNKEDYDKCNTAKPIKSMVDGDSVFKFDKSGPFFFISGNQGSCEKGQKLIVVVLSLNHKSHHAPAPHTSKAPPPKAQTPMAPPPKALTPISQPPKAMTPVSSPSPIASTPKSSPPKAMTPAVSPSPMAYSPMASPPKAMTPISPSPMANTPVWSPTYSPISKTPTSSPSQSPIAVTPTSSPSPALTPMSPSPMSLTPMSSPPSPPVDTPVSSPAAATTPTPNSPTSPTTGTPSDITAPAPTRSSSHALTSSISLISLVGSLVLGSFVW*	339

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl06g00973	338	MobiDBLite	consensus disorder prediction	171	188	-	-
	Eupl06g00973	338	Pfam	Plastocyanin-like domain	34	117	IPR003245	GO:0009055
	Eupl06g00973	338	MobiDBLite	consensus disorder prediction	137	170	-	-
	Eupl06g00973	338	PRINTS	Proline rich extensin signature	213	238	-	-
	Eupl06g00973	338	PRINTS	Proline rich extensin signature	193	210	-	-
	Eupl06g00973	338	PRINTS	Proline rich extensin signature	148	169	-	-
	Eupl06g00973	338	PRINTS	Proline rich extensin signature	169	185	-	-
	Eupl06g00973	338	PRINTS	Proline rich extensin signature	132	144	-	-
	Eupl06g00973	338	FunFam	Early nodulin-like protein 1	23	128	-	-
	Eupl06g00973	338	Gene3D	-	22	128	IPR008972	-
	Eupl06g00973	338	MobiDBLite	consensus disorder prediction	131	193	-	-
	Eupl06g00973	338	CDD	OsENODL1_like	24	124	IPR041846	-
	Eupl06g00973	338	MobiDBLite	consensus disorder prediction	253	279	-	-
	Eupl06g00973	338	ProSiteProfiles	Phytocyanin domain profile.	24	125	IPR003245	GO:0009055
	Eupl06g00973	338	PANTHER	BLUE COPPER PROTEIN	24	185	IPR039391	GO:0009055
	Eupl06g00973	338	SUPERFAMILY	Cupredoxins	23	124	IPR008972	-
	Eupl06g00973	338	MobiDBLite	consensus disorder prediction	280	314	-	-
	Eupl06g00973	338	MobiDBLite	consensus disorder prediction	228	252	-	-
	Eupl06g00973	338	MobiDBLite	consensus disorder prediction	228	314	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl06g00973	Eupl-Chr6	15928516	15930106	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl06g00973	7	338	Phytocyanin Superfamily	AT5G53870	42.541	1.72e-59	193

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl06g00973	-		-	nnu:104599415	258.84