Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00962 ATGGTAGGCTTTGAGGTTGGAACGGTTCCATTTAACACGGACGGTTGGGGTCCGCCGGACACACCTGTTCCTCTCCTCTCCAACCATCCCACCAACGTCCCTTTCGCTCCCTTTAACCGCTCGGAAAAACTCGGCCGCATCGCTGACTGGACTCGAAACTACAACCCTTCTCGCAACACCAACCCTCGCAACCCCTCCGACGCCGTCTTCGACTTCGCTCTTGACGACTCATCCGCTGCTCTCGCTGCCGATGACGATTCCTCCTTCCGCCTCGTTGACGGGAAGCCCCCTCCACGCCCAAAGTTCGGCCCCAAGTGGCGCTTCCAGCAACAGCGCCAACTCCCCCAACGCCGCGACGAAGAAGTCGAAGCCCGCAAGCGCGAAGCTGAGAAGGAGCGCGCCCGCCGCGACCGCCTCTACAACCTCAACCGATCGGGCGGCAACAACCCCCGCCGAGAAGCTGCTGTCTTCAAATCTTCCGTTGACATCCAGCCGGAATGGACCATGCTCGATCAAATCCCCTTCTCCACCTTCTCCAAGCTCTCCTTCTCTGTCCCTGACCCCGAAGACCTCCTCGTCTGCGGTGGTCTTGAGTCCTACGACCGTTCCTACGATCGCATCAACCCCAAGAACGAGAAACGCCTTGAGCGATTCAAGAATCGCAACTTCTTCAAAGTCACCACTACCGACGATCCCATCATCCGTCGCCTTGCCAATGAAGATAAAGCTACTGTTTTTGCAACTGATTCGATTCTCTCCAGTCTTATGTGCGCTCCGAGATCAGTTTACTCTTGGGATATCGTGATTCAGCGAGTTGGGAACAAGTTGTTTTTTGATAAAAGAGATGGGTCGCAGCTTGATCTGCTTTCTGTCAACGAGACCTCGCAGGAGCCGTTGCCCGAAGCCAAGGAAGATATCAATTCGGCATATTCCTTGAGTGTCGAAGCAGCTTATATTAACCAGAATTTCTCTCAGCAGGTTTTGGTTAGGGATGGGACTAAGGTGACGTTTGAGGAGCCTAATCCGTTTGCTGCTGAAGGGGAAGAGGTTGCTTCGGTTGCTTACAGGTATCGGCGGTGGAAACTTGACGATGACATGTATCTTGTTGCCCGGTGTGAGGTTCAGAGTGTGTCGGAAGTGAAAGGGCAGCGGTCGTTCTTGACCTTGAATGCACTTAATGAGTTTGATCCAAAGTACTCCGGGGTTGATTGGAGGCAGAAGCTGGAGACTCAGAGAGGGGCAGTCTTGGCTACAGAGCTTAAGAACAATGCGAACAAGTTGGCAAAGTGGACTGCTCAAGCATTGTTGGCAAGTGCGGATGTGATGAAGTTGGGGTATGTTTCGAGGGTTCATCCTCGTGATCACTTTAACCATGTCATCTTAGCTGTGGTTGGGTATAAGCCAAGGGAGTTCGCGACACAGATCAATCTAAACACTTCGAATATGTGGGGGATTGTTAAGTCTATTGTCGATTTGTGTATGAAATTGAATGAGGGGAAGTATGTTCTAGTGAAAGACCCATCAAAGCCGCAAGTGAGGATTTATGAGGTCCCTGCTGATGCATTCGAGAATGATTATGTGGAGGAGCCATTGCCAGAGGACGAACAAGTGCAGCCGCCTGCTGAAGAAGATGCCAATGGTGGGGAAGCTATTGGATCTGTGAATGATGAGGGAGAGAAGGAGATCGAGGTTGAGGTTTGA 1701 0.5203 MVGFEVGTVPFNTDGWGPPDTPVPLLSNHPTNVPFAPFNRSEKLGRIADWTRNYNPSRNTNPRNPSDAVFDFALDDSSAALAADDDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVEARKREAEKERARRDRLYNLNRSGGNNPRREAAVFKSSVDIQPEWTMLDQIPFSTFSKLSFSVPDPEDLLVCGGLESYDRSYDRINPKNEKRLERFKNRNFFKVTTTDDPIIRRLANEDKATVFATDSILSSLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVNETSQEPLPEAKEDINSAYSLSVEAAYINQNFSQQVLVRDGTKVTFEEPNPFAAEGEEVASVAYRYRRWKLDDDMYLVARCEVQSVSEVKGQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADVMKLGYVSRVHPRDHFNHVILAVVGYKPREFATQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEPLPEDEQVQPPAEEDANGGEAIGSVNDEGEKEIEVEV* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00962 566 MobiDBLite consensus disorder prediction 112 136 - -
Eupl06g00962 566 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 3 539 IPR007783 GO:0003743|GO:0005737|GO:0005852
Eupl06g00962 566 Coils Coil 117 137 - -
Eupl06g00962 566 MobiDBLite consensus disorder prediction 527 566 - -
Eupl06g00962 566 MobiDBLite consensus disorder prediction 88 136 - -
Eupl06g00962 566 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 2 528 IPR007783 GO:0003743|GO:0005737|GO:0005852
Eupl06g00962 566 PIRSF Transl_init_eIF3d 1 546 IPR007783 GO:0003743|GO:0005737|GO:0005852
Eupl06g00962 566 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 5 516 IPR007783 GO:0003743|GO:0005737|GO:0005852
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00962 Eupl-Chr6 15729806 15739942 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00962 3 561 Eukaryotic Initiation Factors Gene Family AT4G20980 76.420 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00962 K03251 - nnu:104599405 1013.45