Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00961 ATGGACTTCGATGAAATTGTTGTTGATACGTTTGTAGAGAAACAGATGGAGAGCCAACATGGTTCATTGAGAACGGATCGAAAGACTGTAGAAAGAAACAGGAGAAATCACATGAAGAACCTCTACTCCAAGCTTAATTCTCTCATCCCAAATCAGAACTCAAAGGAGGCGCTGTCGCTGACTGATCAGCTGGATGAAGCAGCAAAATATATAAAAAGGTTACAGAAAAAAATGGAGAAAATGAAGGCGAAGAAAGAATATTTAATGGGAATGGAAACTATCAGCAAAAGCATGAGTAGTGGAATGATGGTTGGGTTGAAAGCACCCCAAATTGAGATTCAAAATATGGGTTCTGCTCAAGAAGTGGTTCTGATAACTGGGTTGGATCATCAATTCATGTTCTATGAGATTATCCGTGTGCTTCATGAAGAAGGAGCTGAGGTTGTGAATGCCAGTTTTACTGTCGTGGATGATACCGTCTTCCACACTATACATTCAGAGGTTGGAGAATCTGCACCTGGTTTTGGGGCGGCAAGGATATCTAGGAGACTAAAGACGTTTGTCCATGAATTTGTTAATGCACTTTGA 588 0.4065 MDFDEIVVDTFVEKQMESQHGSLRTDRKTVERNRRNHMKNLYSKLNSLIPNQNSKEALSLTDQLDEAAKYIKRLQKKMEKMKAKKEYLMGMETISKSMSSGMMVGLKAPQIEIQNMGSAQEVVLITGLDHQFMFYEIIRVLHEEGAEVVNASFTVVDDTVFHTIHSEVGESAPGFGAARISRRLKTFVHEFVNAL* 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00961 195 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 22 74 IPR011598 GO:0046983
Eupl06g00961 195 Gene3D - 12 100 IPR036638 GO:0046983
Eupl06g00961 195 SMART finulus 28 80 IPR011598 GO:0046983
Eupl06g00961 195 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 24 188 - -
Eupl06g00961 195 Pfam Helix-loop-helix DNA-binding domain 24 75 IPR011598 GO:0046983
Eupl06g00961 195 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 20 90 IPR036638 GO:0046983
Eupl06g00961 195 Coils Coil 57 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00961 Eupl-Chr6 15710718 15725081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00961 16 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 47.872 1.76e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl06g00961 HLH 7.9e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00961 - - nnu:104599406 250.366