Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00960 ATGGAGGAAGATGCCAACTCTTGGTTAAGGAGAGCGAAATTCTCTCACACTGTTTATCATAGGTTGGATTCCTCCAGGCTGCCTTCTGTTCCATTGTCAAGATTACCACCTGTTTCGTTCACTCGGCAACCGGATCGCAATTTGGGATTGAAGTCTAGGCCTGGATCGACTACCGATTATCATAAATCAAGATCCTTTAATGGTCAAATTCGGCAAAATCCTAGCACCAACAAACAAGTATCTTTATCCCCTCAACCGGATCTCAATTTGGGATTGAAGTCTAGCCCTGGATCGACAACCGATTTTCATAAATCAGGATCTTTTAATGGTCATATTCAGCGAAATCCTAGCATCAACAAACAGAGATCTTTATCCCCTCTACCTGAAACTGTCCTTTCGGACGCATTTAAGGAAGCTCGGTCTGATAGGAAGAGATTCTCGACTCCATGTCCTCGAAGAAAAGAACCAGAGAAGGGAATTATTGGCAAATTGTTCAACAAAAGTTCCCATGGTGCTCGGGCATCTGATTCTTTGTCATCATCAAGTACGAGCCCTCTTAAGCACTTTAATTCAATGAAAAAATCCGGGAAATGGAAGAACCGTAAGGAGTCAACATGGACGAAGTACTTTGACCATGGAGGGGGAAGGGTCACTGCTGTGGAAACAGCAGATGAATGGATGGTCGATCTCTCAAAGTTGTTTCTTGGGCTTAGGTTTGCCTGTGGAGCGCACAGTCGGCTTTACCATGGGATATATAAGGATCAGCCTGTTGCTGTCAAAATTATTAGGCAGCCCGATGATGACGAAAATGGAGCCATGGCGGCTCGGCTAGAGAAGCAGTTCAATAGGGAAGTTACTCTTCTATCTCATCTCCACCATCAAAATGTAATCAAGTTGGTAGCGGCATGTAGAAAACCACCGATCTTTTGTATCATCACTGAATATCTTTCAGGGGGTTCCTTGAGGGCATTCTTGCACAAACTCGAGCACAAATCTCTTCCTCTACAGAAACTGAATGAAATTGCTCTGGATATTGCTCGAGGAATGGAATATGTTCACTCACAAGGTGTCATTCATCGGGACCTTAAACCCGAGAATATCCTCTTTGATCAAGACTTTCGCTTGAAAGTTGCGGATTTTGGAATAGCTTGTGAGGAGGCCTACCGTGATTCCTTGGCTGAGGATCCTGGTACCTATCGTTGGATGGCACCCGAGATCATCAAACAAAAACCGTATGGACGGAAGGTTGATGTTTACAGCTTTGGACTCCTCTTATGGGAGATGGTGGCCGGAAGAATCCCTTATGAGGATATGACACCGATCCAGGCAGCTTTTGCTGTAGTGAATAAGAACATGAGACCTGTGATACCGGTGGACTGCCCACCTGCCCTACGAGCTTTGATTGAGCAATGTTGGGCCTTGCATCCTGAGAAGAGGCCTGACTTTTGGCAGATTGTAAAGGTATTAGAGCAATTCGAGTCTTCACTTGCTCGAGACGGCACATTGAACCTAGTTCAAAACTCAACTTGCCAAGATCACAAGAAGGGGCTACTTCATTGGATTCAGAAGCTTAGCCCTGCAACTCCTGACAGTTCACCAATGCCTAAACCCAAATTTTTCTAA 1623 0.4492 MEEDANSWLRRAKFSHTVYHRLDSSRLPSVPLSRLPPVSFTRQPDRNLGLKSRPGSTTDYHKSRSFNGQIRQNPSTNKQVSLSPQPDLNLGLKSSPGSTTDFHKSGSFNGHIQRNPSINKQRSLSPLPETVLSDAFKEARSDRKRFSTPCPRRKEPEKGIIGKLFNKSSHGARASDSLSSSSTSPLKHFNSMKKSGKWKNRKESTWTKYFDHGGGRVTAVETADEWMVDLSKLFLGLRFACGAHSRLYHGIYKDQPVAVKIIRQPDDDENGAMAARLEKQFNREVTLLSHLHHQNVIKLVAACRKPPIFCIITEYLSGGSLRAFLHKLEHKSLPLQKLNEIALDIARGMEYVHSQGVIHRDLKPENILFDQDFRLKVADFGIACEEAYRDSLAEDPGTYRWMAPEIIKQKPYGRKVDVYSFGLLLWEMVAGRIPYEDMTPIQAAFAVVNKNMRPVIPVDCPPALRALIEQCWALHPEKRPDFWQIVKVLEQFESSLARDGTLNLVQNSTCQDHKKGLLHWIQKLSPATPDSSPMPKPKFF* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00960 540 CDD STKc_MAP3K-like 242 489 - -
Eupl06g00960 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 357 369 IPR008271 GO:0004672|GO:0006468
Eupl06g00960 540 MobiDBLite consensus disorder prediction 170 190 - -
Eupl06g00960 540 FunFam serine/threonine-protein kinase HT1 318 511 - -
Eupl06g00960 540 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 110 496 - -
Eupl06g00960 540 MobiDBLite consensus disorder prediction 164 194 - -
Eupl06g00960 540 SMART serkin_6 233 492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00960 540 Gene3D Transferase(Phosphotransferase) domain 1 318 524 - -
Eupl06g00960 540 ProSiteProfiles Protein kinase domain profile. 233 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00960 540 PRINTS Tyrosine kinase catalytic domain signature 351 369 IPR001245 GO:0004672|GO:0006468
Eupl06g00960 540 PRINTS Tyrosine kinase catalytic domain signature 416 438 IPR001245 GO:0004672|GO:0006468
Eupl06g00960 540 PRINTS Tyrosine kinase catalytic domain signature 460 482 IPR001245 GO:0004672|GO:0006468
Eupl06g00960 540 PRINTS Tyrosine kinase catalytic domain signature 397 407 IPR001245 GO:0004672|GO:0006468
Eupl06g00960 540 PRINTS Tyrosine kinase catalytic domain signature 313 326 IPR001245 GO:0004672|GO:0006468
Eupl06g00960 540 MobiDBLite consensus disorder prediction 50 127 - -
Eupl06g00960 540 Gene3D Phosphorylase Kinase; domain 1 221 317 - -
Eupl06g00960 540 MobiDBLite consensus disorder prediction 27 127 - -
Eupl06g00960 540 Pfam Protein tyrosine and serine/threonine kinase 241 489 IPR001245 GO:0004672|GO:0006468
Eupl06g00960 540 SUPERFAMILY Protein kinase-like (PK-like) 214 489 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00960 Eupl-Chr6 15696841 15700364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00960 1 539 MAP Kinase Kinase Kinase AT5G58950 54.348 0.0 590
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Eupl06g00960 PK_Tyr_Ser-Thr 1.3e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00960 - - jre:109014417 741.495