Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00956 ATGGCTATACACCCTCTCCCTCTACTTCTTCTACTGCTAGTACTCAAAATCTTATCCCTCCGACCAACATCTGCTGTCGATTTCGTTTTCAATGGCTTTGATTCATCCAATCTCTTATTCTACGGTAACGCTGCACTTGAATCAGATATTCTCTCACTAACAAATGACTCCACTTTCTCCATGGGTCGTGTTCTCTACTCATCCAAAGTCCAAACAAAATCACCCAATTCACCCAATCTTCTTCCCTTCTCCACTTCTTTCATCTTCTCTATCGCTCCATACAAGAATTATCTCCCTGGTCATGGCCTAGTCTTCCTCTTCGCACCTTCCACCGGTATCGAAGGCGTTAGCGAAGCTCAACACCTTGGACTCTTTAATCGCACAAACGATGGTAATCCCAATAACCATGTGTTTGGTATCGAATTCGATGTATTCGAAAACCCGGAATTCAATGACATCGACGCCAATCATGTCGGCGTCGATGAGAATTCTCTCACATCGGTCTCCGCACATCCAGCCGGGTATTGGCCTGATAATGATGATGGGTCCTTTAATGAGCTGTCGCTAAATAATGGTGTCAATTATCAAGTATGGATCGATTACTTCGATTTCCAGCTCAATGTCACTATGGCTCCGGCGGGCCTGAAAAGGCCTCGACAGCCTTTAATAAGTGTCACCCGTAATCTTTCCGATGTTCTTTTAGATGAAATGTATGTTGGGTTTTGCGCGGCGACAGGAGCATTAGTTGAAAGTCACAGAATTCTGGCATGGAGCTTTAGTAATTCGAACTTTTCGATGAGCGAAGATTTGATTACGTCGGACTTGCCATCATTTGTTCCTCCAGGGAGTTCTGTTTTTCGCTCGAAAGGTTTCATTGCAGGCATTACAGTGGTGATCGTCTTTCTCATATGTGGTAGTGCTGCTATTTCTCTGTTTTTGGTTAAGAGGAAGCGAAGGCGACGGAGGGATATAGAAGAAATGGAAGAATGGGAATTGGAGTATTGGCCACATCGAATTACTTATCAAGAAATTTACGCGGCGACAAAGGGATTTTCGGATGAAAATGTGATTGGATTTGGAGGGAATGGGAAGGTCTATAAAGGGGTTATGGCAGGAGGAGTTGATGTCGCTGTGAAGCGCATTTCTCATGAAACTGAAGCAGGGATGAGGGAATTCTTGGCCGAGGTTTCGAGCCTCGGTCGATTGAAACACAGAAACTTGGTGGGATTGAGAGGTTGGTGTAAAAGAGAGAAGGGGAGCTTAATCTTGGTTTATGATTTCATGGAGGGTGGGAGTTTGGATAGGAGGATTTTTGAATGTGATGAGAGAGATATGTTGAACTGGGAAGATAGGATTAGAGTCTTGAAAGATGTTGCTGCTGGGGTTCTATACTTACATGAGGGATGGGAAGCCCGAGTCTTACATAGGGACATAAAGGCTAGTAATGTCTTGCTTGACAAAGAAATGGGTGGAAGGTTGGGGGATTTTGGATTGGCTCGGATGCACGGGCACGGGCAGGTGGCTAACACTACTCGCGTGGTGGGCACAGTGGGGTATATGGCACCTGAAGTGATCCGAAGTGGGCGTGCATCAGCGCAAACTGATGTGTTTGGTTTTGGGATCTTGATACTTGAGGTTGCTTGTGGGAGGAGGCCTATTGAAGATGGCAAGCCACTTTTGGTTGATTGGGTGTGGGGGCTAATGGAGCAAGGTGAACTGGTGTGTGCGCTCGATGAGCGGTTGAGGGCCAAGGGAGGCTTCGACAATGAGGAGGTGGAGAGGGTGCTTCATTTGGGTTTGTTGTGTGCATACCCAGAGCCGCGTGCCCGACCTACGATGAGACAAGTGGTGAAAGTGTTGGAGGGGACGTCCGATGCTTATGAGTCAGAAGGAGAAGGAATGGAGGTGTGTCTGCTTGACAAGATGAAGTCGACGACGATGTGGTCCAAGTATCATCATAGCTTGTGTCACGGAGGGCATCCAACCTTTGAGCAAATTCGACAATCACTCTCATCTTCCACGTCTCTCTCTGCGTCGGACCTAATTGTGGAGGGTCGATGA 2061 0.4687 MAIHPLPLLLLLLVLKILSLRPTSAVDFVFNGFDSSNLLFYGNAALESDILSLTNDSTFSMGRVLYSSKVQTKSPNSPNLLPFSTSFIFSIAPYKNYLPGHGLVFLFAPSTGIEGVSEAQHLGLFNRTNDGNPNNHVFGIEFDVFENPEFNDIDANHVGVDENSLTSVSAHPAGYWPDNDDGSFNELSLNNGVNYQVWIDYFDFQLNVTMAPAGLKRPRQPLISVTRNLSDVLLDEMYVGFCAATGALVESHRILAWSFSNSNFSMSEDLITSDLPSFVPPGSSVFRSKGFIAGITVVIVFLICGSAAISLFLVKRKRRRRRDIEEMEEWELEYWPHRITYQEIYAATKGFSDENVIGFGGNGKVYKGVMAGGVDVAVKRISHETEAGMREFLAEVSSLGRLKHRNLVGLRGWCKREKGSLILVYDFMEGGSLDRRIFECDERDMLNWEDRIRVLKDVAAGVLYLHEGWEARVLHRDIKASNVLLDKEMGGRLGDFGLARMHGHGQVANTTRVVGTVGYMAPEVIRSGRASAQTDVFGFGILILEVACGRRPIEDGKPLLVDWVWGLMEQGELVCALDERLRAKGGFDNEEVERVLHLGLLCAYPEPRARPTMRQVVKVLEGTSDAYESEGEGMEVCLLDKMKSTTMWSKYHHSLCHGGHPTFEQIRQSLSSSTSLSASDLIVEGR* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00956 686 Gene3D - 24 271 - -
Eupl06g00956 686 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 313 427 - -
Eupl06g00956 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 26 262 IPR013320 -
Eupl06g00956 686 SMART serkin_6 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00956 686 Gene3D Phosphorylase Kinase; domain 1 311 427 - -
Eupl06g00956 686 Pfam Legume lectin domain 26 268 IPR001220 GO:0030246
Eupl06g00956 686 Gene3D Transferase(Phosphotransferase) domain 1 428 634 - -
Eupl06g00956 686 Pfam Protein kinase domain 352 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00956 686 ProSiteProfiles Protein kinase domain profile. 351 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00956 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Eupl06g00956 686 SUPERFAMILY Protein kinase-like (PK-like) 326 621 IPR011009 -
Eupl06g00956 686 FunFam L-type lectin-domain containing receptor kinase S.4 428 632 - -
Eupl06g00956 686 CDD lectin_legume_LecRK_Arcelin_ConA 26 257 IPR001220 GO:0030246
Eupl06g00956 686 CDD STKc_IRAK 357 622 - -
Eupl06g00956 686 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Eupl06g00956 686 FunFam L-type lectin-domain containing receptor kinase S.4 24 267 - -
Eupl06g00956 686 PANTHER - 42 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00956 Eupl-Chr6 15627404 15629901 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00956 22 571 Receptor kinase-like Gene Family AT4G04960 65.405 0.0 714
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Eupl06g00956 Pkinase 2.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00956 - - nnu:104599394 991.104