Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00954 ATGGGTTGCATTTGTGGTAAGGCTTCTGCTATTGATGATAGTAGGGAGAGTCCGAGAGAGAGGTCGAGTAAAGCGTCATCAGACTTACGTGTGTCTCGAGTGACTTCTTCAAGGAGAGAAGAAATCTTTCGAGAGAAAGATAGACTGGATGGTAGAGATGGAAGGGTTACATTGATTGAGAAGCAAGGGAATGGTTCGGCTCGGTTGCAGAGTGAGAATTTTGAGAGGAAGAGGGAGAAGCCTGAGTATCATGCTGCTCACCATCCGGGGGTTGGCAGCATTCCGAAGGCTACGGAAGGGCAGCAGGTTGCGGCAGGTTGGCCTGCCTGGCTTGCTGCAGTGGCTGGAGAAGCCATTAGGGGATGGATACCACGTCGTGCAGATTCTTTTGAGAAACTAGATAAAATTGGGCAAGGAACTTACAGTAACGTTTACAGGGCTCGCGATCTTGATCATGGGAAAATTGTTGCTTTGAAAAAAGTACGGTTTGATAACCTGGAGCCTGAAAGTGTTCGCTTTATGGCAAGGGAAATCCACATTCTGCGTAGGCTTGATCATCCGAATATAATAAAACTGGAAGGCCTAGTGACATCTCGGATGTCTTGCAGCTTATATCTTGTTTTTGAGTATATGGAGCATGATCTTGCTGGACTTGCTTCGTTCCCTGGCCTCAAGTTCACGGAACCACAGGTTAAATGTTACGTGCAGCAACTGCTTCGTGGACTTGATCACTGTCATAGTCGCGGTGTTCTGCATCGTGACATAAAGGGTTCAAATCTTCTAATTGACAACAGCGGCATCTTGAAGATTGCAGACTTTGGCTTGGCAAGTTTTTTTGATCCTCATCAAACTCAGCCATTGACAAGCCGTGTTGTGACTCTTTGGTATCGACCGCCAGAGCTTTTACTTGGAGCCACTCAATATGGAATTGCTGTGGATTTGTGGAGTACTGGTTGCATACTTGCAGAACTATATGCGGGCAAGCCTATCATGCCTGGAAGAACGGAGGTGGAGCAGTTGCATAAGATTTTCAAACTTTGTGGCTCACCGTCTGAGGATTATTGGAGAAAGGCAAAATTGCCACATGCAACCATTTTCAAACCCCAACATCCTTATAGACGATGTGTTGCAGAAACATTCAAAGACTTTCCTGCAGCAGCTTTAGGACTTACCGATACTCTGCTTTCGATAGATCCCACAGATCGTGGAACTGCAGCTTCTGCTCTCAAGAGTGAGTTCTTTACAACAAAACCACTTGCTTGTGATCCTTCTAGCCTGCCAAAATATCCTCCAAGCAAAGAGTTCGATGCAAAAGTACGGGATGAAGAAGCTAGAAGAATAGGGGCACCAGGAGTCAAGGGACAGAGGTTTGACCTAGAAAGGAAAGGACCAAGGGAATCCCGGGCAATTCCGGCACCTGATGCGAATGCCGAGTTAGTATTGTCAATGCAGAAAAGACAAGGTCAGTCCAACTCTAAGAGTCGAAGTGAGAAGTTCAATCCTCATCAGGAGGAAGTTGCTTCTGGATTTCCAATTGATCCACCTAGACAATCACAAGCTGTAGAAGAAACAAGCAAAGGTCCCCAGGGGCATTTTCATAAGAGAGCTTCACATTCAGGGCCATTGGTAGCTTCACATTCAGGGCCATTGGTTCACCGGACTGCATGGGCTAAGGCTGGGAAAAACCAGGATGATGCTCCAAAGATTTCAATTGGGGCTGACCTATCAGCCTTGTCTGGCTTAGTAGCAGCAAGGAGTTTGTTATCTGACAATCGCAGAGAAAGGTCTGGTCCTTCACAACCAGAAGCGACTAACTTAAGTGGCAGGTTTCCGGGGACATCCGACGAGGATTCAGAATCCACTAGAAAGCTGGATCACAAGTATCATGCACAGGGTCTTCCAGGTTCTCATCAGAAAGAAGATGGAAGGAACAGAAACAAGGACCAATTTCTGCAGGGGTATGGGTCCAAGGGAAACAAGATCCACTACTCTGGTCCACTAGTTCCTTCGGGCAACGTGGATCAGATGCTCAAGGATCACGATCGCCAGATCCAAGAAGTCGTTCGACGAGCACGGATTGACAAGGCAAAAATTAGGAAAGTTCCGGCAGAAGGTATCAAAATACCAGCCAATCCAATATTTACCTCTGGTCGTGGAGCTGTATAA 2166 0.4672 MGCICGKASAIDDSRESPRERSSKASSDLRVSRVTSSRREEIFREKDRLDGRDGRVTLIEKQGNGSARLQSENFERKREKPEYHAAHHPGVGSIPKATEGQQVAAGWPAWLAAVAGEAIRGWIPRRADSFEKLDKIGQGTYSNVYRARDLDHGKIVALKKVRFDNLEPESVRFMAREIHILRRLDHPNIIKLEGLVTSRMSCSLYLVFEYMEHDLAGLASFPGLKFTEPQVKCYVQQLLRGLDHCHSRGVLHRDIKGSNLLIDNSGILKIADFGLASFFDPHQTQPLTSRVVTLWYRPPELLLGATQYGIAVDLWSTGCILAELYAGKPIMPGRTEVEQLHKIFKLCGSPSEDYWRKAKLPHATIFKPQHPYRRCVAETFKDFPAAALGLTDTLLSIDPTDRGTAASALKSEFFTTKPLACDPSSLPKYPPSKEFDAKVRDEEARRIGAPGVKGQRFDLERKGPRESRAIPAPDANAELVLSMQKRQGQSNSKSRSEKFNPHQEEVASGFPIDPPRQSQAVEETSKGPQGHFHKRASHSGPLVASHSGPLVHRTAWAKAGKNQDDAPKISIGADLSALSGLVAARSLLSDNRRERSGPSQPEATNLSGRFPGTSDEDSESTRKLDHKYHAQGLPGSHQKEDGRNRNKDQFLQGYGSKGNKIHYSGPLVPSGNVDQMLKDHDRQIQEVVRRARIDKAKIRKVPAEGIKIPANPIFTSGRGAV* 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00954 721 MobiDBLite consensus disorder prediction 1 38 - -
Eupl06g00954 721 MobiDBLite consensus disorder prediction 615 647 - -
Eupl06g00954 721 Pfam Protein kinase domain 130 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00954 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 250 262 IPR008271 GO:0004672|GO:0006468
Eupl06g00954 721 MobiDBLite consensus disorder prediction 12 38 - -
Eupl06g00954 721 SUPERFAMILY Protein kinase-like (PK-like) 123 420 IPR011009 -
Eupl06g00954 721 ProSiteProfiles Protein kinase domain profile. 130 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00954 721 MobiDBLite consensus disorder prediction 433 468 - -
Eupl06g00954 721 ProSitePatterns Protein kinases ATP-binding region signature. 136 159 IPR017441 GO:0005524
Eupl06g00954 721 MobiDBLite consensus disorder prediction 482 496 - -
Eupl06g00954 721 FunFam probable serine/threonine-protein kinase At1g54610 117 212 - -
Eupl06g00954 721 MobiDBLite consensus disorder prediction 598 614 - -
Eupl06g00954 721 PANTHER CELL DIVISION PROTEIN KINASE 128 419 - -
Eupl06g00954 721 Gene3D Phosphorylase Kinase; domain 1 117 212 - -
Eupl06g00954 721 MobiDBLite consensus disorder prediction 424 547 - -
Eupl06g00954 721 MobiDBLite consensus disorder prediction 589 663 - -
Eupl06g00954 721 FunFam probable serine/threonine-protein kinase At1g54610 213 453 - -
Eupl06g00954 721 SMART serkin_6 130 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00954 721 CDD STKc_CDK9_like 130 414 - -
Eupl06g00954 721 Gene3D Transferase(Phosphotransferase) domain 1 213 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00954 Eupl-Chr6 15566968 15582002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00954 122 446 Core Cell Cycle Gene Families AT5G10270 53.372 3.86e-117 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Eupl06g00954 Pkinase 2.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00954 - - nnu:104599391 1170.61