Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00940 TTTTTTCTCTCGCACAGTCTCCCTCACAATACGGCAGAGAAGATGGAGAGACCTTTGCTTGGCGAAACAAGCTGTGGCGAAAGCAGAGAGCAGACAGAGACGGCAAATACGTATCGGAAAAGGTCCTATGCCATAGCTCACGGCACGCCTTATCAGATGGCCGCAGCACTAGTGGATCTGGCTGAAGATGGTATTGGTTTACCTGAGGAAGTTCTAGATGGATCAAGATTTGAAAGCGCGGCAAAGTTCTACTTCATATATATCCAATTTGATTTTCTGTGGTCCCTTAATCTTTTCGCCTTGATAGCACTGAATTTCTTTGAGAAGCCTTTATGGTGTGCCAAGTATACTACATACTCGTGCAATGATAGGGACTACTTTTTCCTTGGGCAGTTGCCGTACTTGACGAGTGCTGAGTCTCTTGTTTATGAGGGCGTAACTCTCTTCATACTCATTATGCATACTTTCTTTCCAATTGCGTATGAAGGATGCTATCTCTATCGGAAGAACCGTTTGAATAACTTGAAAGTCATTTTCTTGTCAATTTTGGCTCTTGATTTTTTGGTTTATGGTCTCTATCTGTCCCCTGTGGCCATTTCTTCTCTACCTTTGAGGATTGCTCCATATATTCGCGTTGTCTTTGTTATTTTAAACATTAGGGAGTTACGAGCATGCGCCGTCACCTTGGCTGGAATGGTGGGCGTGTACCTCAATGTCTTGGCTGTTTGGCTCTCATTTCTGTTATTCTCCAGTTGGTTGGCCTATGTCATATTTGAAGATACATTACAGGGAAAGACCACATTTTATTCATACGGTGCCACATTGTATCAAATGTTTGTTCTATTCACCACGTCCAACAACCCCGATGTGTGGATTCCTGCATACAAGGATTCACGTTGGTCTTGCCTGTTTTTCGTTCTCTACGTGCTATTGGGGGTGTACTTTCTCACTAACCTGATTCTTGCTGTTGTATATGATAGCTTCAAAGATCAGCTTGCGAAGCAAGTTGCCGAGATGGACTCCATGCGGAAAAGAATATTGGGAAAAGCCTTCAGTCTTATTGATAAAGACAAAAATGGGTTTCTTAACAAAGAGCAATGCATTCGTTTGTTTGAAGAATTGAATAAATACAGGTCTTTGCCAAAGATCTCAAGGGAAGATTTTGAGTTGATCTTTGATGAGCTAGATCAAAGTAATGACTTCAAGATTAATTTGGATGAATTTGCTGATCTTTGCAATGCGATTGCATTGAAATTTCAAAAGGAGGATTCTCCATCTTGGTTCGAAAATTATCCATCATTTTACCGTTCACCTTCAAGCGAAAAGTTGAAAGCTTTTGTCCGGAGCCCCACTTTTGGATACATAATAGCTTTTATACTCATGCTGAATCTAGTTGCTGTTATTATTGAAACAACGCTTGATATAGAGAACAATTCTGCTCAGAAGATTTGGCAGAAGTTTGAGTTTGTCTTCGGCTGGATTTATGTTCTGGAAATGGCTTTGAAAATCTACTCATTTGGATTTGAGAATTATTGGAGGGATGGCCAAAATCGCTTTGACTTTGTTGTGACATGGATAATTGTTATTGGAGAAACAACAACTTTTGCCTTCCCCCGTGAGCTTCCTTTTCTTTCAAATGGCGAGTGGATTCGGTACCTTCTTATCGCAAGAGTGTTGCGACTAATAAGGCTTTTGATGCATATCAAAGCTTACAGAGCTTTTGTTGCAACGTTCTTAACCCTCATACCAAGTCTGATGCCATATCTTGGGACTATCTTTTGTATACTATGTATTTACTGCTCTCTTGGTACACAGATCTTCGGCGGGATTGTTAACCCTGGAAACCCCAGTTTGGAAGGATCAGCGCTTTCTGATAACGACTATCTGCTTTTCAATTTTAATGACTACCCAAATGGGATGGTGACACTTTTCAATTTACTGGTCATGGGAAACTGGCAAATATGGATGCAGGGCTACAAGGAATTGACAGGAACATCTTGGACCCTTGCATACTTTGTCAGCTTTTACCTCATAACGGTCTTGCTACTTTTGAATCTGGTCGTAGCATTTGTCTTGGAGGCCTTCTTTGCTGAAATGGAACTTGAAAAAACAGATGAATCTGAAGAAGAGGGCAAGGAAGAAGGAAGGAAGGACAGACGCCGATATGTAGGCTCAAAAACACGGAGTCAAAGAGTTGATGCTCTTCTTCATCGTATGTTGAGTGCAGAGCTGAACGAAACTCAATGCTCTAATGCATAG 2259 0.4121 FFLSHSLPHNTAEKMERPLLGETSCGESREQTETANTYRKRSYAIAHGTPYQMAAALVDLAEDGIGLPEEVLDGSRFESAAKFYFIYIQFDFLWSLNLFALIALNFFEKPLWCAKYTTYSCNDRDYFFLGQLPYLTSAESLVYEGVTLFILIMHTFFPIAYEGCYLYRKNRLNNLKVIFLSILALDFLVYGLYLSPVAISSLPLRIAPYIRVVFVILNIRELRACAVTLAGMVGVYLNVLAVWLSFLLFSSWLAYVIFEDTLQGKTTFYSYGATLYQMFVLFTTSNNPDVWIPAYKDSRWSCLFFVLYVLLGVYFLTNLILAVVYDSFKDQLAKQVAEMDSMRKRILGKAFSLIDKDKNGFLNKEQCIRLFEELNKYRSLPKISREDFELIFDELDQSNDFKINLDEFADLCNAIALKFQKEDSPSWFENYPSFYRSPSSEKLKAFVRSPTFGYIIAFILMLNLVAVIIETTLDIENNSAQKIWQKFEFVFGWIYVLEMALKIYSFGFENYWRDGQNRFDFVVTWIIVIGETTTFAFPRELPFLSNGEWIRYLLIARVLRLIRLLMHIKAYRAFVATFLTLIPSLMPYLGTIFCILCIYCSLGTQIFGGIVNPGNPSLEGSALSDNDYLLFNFNDYPNGMVTLFNLLVMGNWQIWMQGYKELTGTSWTLAYFVSFYLITVLLLLNLVVAFVLEAFFAEMELEKTDESEEEGKEEGRKDRRRYVGSKTRSQRVDALLHRMLSAELNETQCSNA* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00940 752 ProSiteProfiles EF-hand calcium-binding domain profile. 383 418 IPR002048 GO:0005509
Eupl06g00940 752 FunFam Two pore calcium channel protein 1 442 574 - -
Eupl06g00940 752 FunFam Two pore calcium channel protein 1 221 332 - -
Eupl06g00940 752 Gene3D - 353 415 - -
Eupl06g00940 752 SUPERFAMILY EF-hand 338 423 IPR011992 -
Eupl06g00940 752 CDD EFh 349 411 IPR002048 GO:0005509
Eupl06g00940 752 MobiDBLite consensus disorder prediction 709 729 - -
Eupl06g00940 752 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 15 750 IPR044581 GO:0005245
Eupl06g00940 752 MobiDBLite consensus disorder prediction 703 729 - -
Eupl06g00940 752 Gene3D - 441 573 IPR027359 -
Eupl06g00940 752 Pfam Ion transport protein 151 331 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl06g00940 752 Pfam Ion transport protein 450 696 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl06g00940 752 Gene3D - 225 352 - -
Eupl06g00940 752 Gene3D - 574 736 - -
Eupl06g00940 752 Coils Coil 325 345 - -
Eupl06g00940 752 ProSiteProfiles EF-hand calcium-binding domain profile. 342 377 IPR002048 GO:0005509
Eupl06g00940 752 SMART efh_1 346 374 IPR002048 GO:0005509
Eupl06g00940 752 SMART efh_1 387 415 IPR002048 GO:0005509
Eupl06g00940 752 SUPERFAMILY Voltage-gated potassium channels 449 695 - -
Eupl06g00940 752 FunFam Two pore calcium channel protein 1 575 731 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00940 15 752 Ion Channels AT4G03560 66.982 0.0 1037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00940 K16900 - ming:122092726 1073.54