Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00934 ATGGGGAGCCACCACCTCACAGAAGCTCCCCCGCCCGGATGGCAGTCCATCCCTCCATCTCCCGAAATGGGTCAAATGGTTTGCGGAACCTGTCGCACTCTACTTTCTTATCCAAAAGGAGCCATACATGTTAAATGCTCAAGCTGTCAGACAATCAATCTTGTATTAGAGGCTCATCAGGTTGGGAATGTTAAGTGTGGGAGTTGTTCTGTGTTGCTGATGTACCCATATGGAGCTCCATCAGTTAGGTGTTCCTGTTGCCGTTCTGTGACAGAAATTGGAGTGCACAACAAACGGCCCCCACTTTCTGTCCAACAGGGCCAACCTCCCGCAATTCCCAACCCTGTGCATTAG 354 0.5056 MGSHHLTEAPPPGWQSIPPSPEMGQMVCGTCRTLLSYPKGAIHVKCSSCQTINLVLEAHQVGNVKCGSCSVLLMYPYGAPSVRCSCCRSVTEIGVHNKRPPLSVQQGQPPAIPNPVH* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00934 117 Gene3D - 40 73 - -
Eupl06g00934 117 PANTHER PROTEIN LSD1 10 115 IPR040319 -
Eupl06g00934 117 NCBIfam zinc finger domain, LSD1 subclass 64 92 IPR005735 -
Eupl06g00934 117 NCBIfam zinc finger domain, LSD1 subclass 25 55 IPR005735 -
Eupl06g00934 117 Pfam LSD1 zinc finger 66 90 IPR005735 -
Eupl06g00934 117 Pfam LSD1 zinc finger 28 52 IPR005735 -
Eupl06g00934 117 MobiDBLite consensus disorder prediction 98 117 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Eupl06g00934 zf-LSD1 1.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00934 - - tss:122639452 180.644