Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00923 ATGGACATGGCGAGAGACGTATCGGTTTCGAACCGGATCATAGGCCGGAACGCAAGCCAATCCCCGAGAGCAAAGGGCCCGGCTCCGTTTCTCTTTAAGACGTACGATCTCCTTGAAGTAGAAGGATACGACGGAGACGATCGCAGCAGGATCGTGTCGTGGAACAGCGAGGGGACTGGATTTGTTGTGTGGTCTCCTCAGGAGTTCTCAGAGTTGCTGTTGCCTAAATATTTCAAGCACAACAACTTCTCCAGCTTCATTCGCCAGCTAAATACCTATGGATTTAAGAAATTGGCCTCGAACCGATGGGAGTTTCAGCACGAAAAGTTCCAAAAGGGAAAGAGGCATTTGCTGATTGAGATAACAAGGAAGAAGTGCGAGCCAAGTGCCTTCCCTGCCTTCCTGAAGGCCTCTGGAAAAGACTCAACAGATGCTTTTGAGGAAAACATCCCCCTACTACTGGAGGAAAACAAGAACCTAAGAAAAGAGAAGTTGGAATTACAAATGCAAATAGCTCAATTCAAAGCTCTTGAGATAAAGCTGTTAAACTGCCTCTCCCAATACATGGGCAGCCACAACAAAGTTAGAAGAAACAAGGAAACGTTTGTGATCTATGGACACGGTGAGAGACGTATCGGTGTCGAACCGATCATAAACCGGAACGCAAGCCAATCCCCAAGAACAAGGTGTCCGGCTCCTTTTCTTTCTAAGACGTACGATCTCCTTGAAGTAGAAGGATACGACGGTGACGATGGTAGCAGGATCGTGTCGTGGAACAGAGAGGGGACTGGATTTGTTGTGTGGTCTCCTCAGGAGTTCTCAGAGTTGCTGTTGCCTAAATACTTCAAGCACAACAATTTCTCTAGCTTCATTCGCCAGCTAAATACCTATGGATTTAAGAAATCAGCGTCGAACCGATGGGAATTCCAACACGAAAAGTTCCAAAAGGGAAGGAGGCATTTGCTGATTGAGATAATGAGGAAGAAGTGCGAGCCGAGCGCCTTCCCTTCCTTCCTCAAGGCCTACGAAAAAGACTCAGAGGATGCTGTCGACGAGAACAACCGCCTACTACTGGAGGAGAACAAGAACCTAAGGAAAGAGAAGCAGGAATTGCAAATGCAGATAGCTCAATTCAAAGATCTTGAGACAAAGCTATTAGACTGTCTCTCTCAATACACAAGGAGGTTAGAGGAGTATGTTAGAAGCTGA 1209 0.4665 MDMARDVSVSNRIIGRNASQSPRAKGPAPFLFKTYDLLEVEGYDGDDRSRIVSWNSEGTGFVVWSPQEFSELLLPKYFKHNNFSSFIRQLNTYGFKKLASNRWEFQHEKFQKGKRHLLIEITRKKCEPSAFPAFLKASGKDSTDAFEENIPLLLEENKNLRKEKLELQMQIAQFKALEIKLLNCLSQYMGSHNKVRRNKETFVIYGHGERRIGVEPIINRNASQSPRTRCPAPFLSKTYDLLEVEGYDGDDGSRIVSWNREGTGFVVWSPQEFSELLLPKYFKHNNFSSFIRQLNTYGFKKSASNRWEFQHEKFQKGRRHLLIEIMRKKCEPSAFPSFLKAYEKDSEDAVDENNRLLLEENKNLRKEKQELQMQIAQFKDLETKLLDCLSQYTRRLEEYVRS* 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00923 402 Coils Coil 339 384 - -
Eupl06g00923 402 FunFam Heat stress transcription factor A-6b 227 329 - -
Eupl06g00923 402 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 226 385 IPR027725 -
Eupl06g00923 402 SUPERFAMILY "Winged helix" DNA-binding domain 26 124 IPR036390 -
Eupl06g00923 402 Coils Coil 143 177 - -
Eupl06g00923 402 FunFam Heat stress transcription factor A-6b 23 125 - -
Eupl06g00923 402 SMART hsfneu3 26 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g00923 402 SMART hsfneu3 230 328 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g00923 402 Gene3D - 227 329 IPR036388 -
Eupl06g00923 402 Gene3D - 23 125 IPR036388 -
Eupl06g00923 402 SUPERFAMILY "Winged helix" DNA-binding domain 231 328 IPR036390 -
Eupl06g00923 402 PRINTS Heat shock factor (HSF) domain signature 73 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g00923 402 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g00923 402 ProSitePatterns HSF-type DNA-binding domain signature. 74 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g00923 402 Coils Coil 389 402 - -
Eupl06g00923 402 Pfam HSF-type DNA-binding 30 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
Eupl06g00923 402 Pfam HSF-type DNA-binding 234 328 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00923 Eupl-Chr6 14944823 14951966 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00923 231 392 HSF AT5G62020 35.385 1.13e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Eupl06g00923 HSF_DNA-bind 4e-29 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00923 K09419 - ming:122059901 281.182