Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00888 ATGAGATTAGAGAAGTGTTGGTTTTGTTCCTCCACAATTTATCCGGGGCATGGTATTCAGTTTGTACGCAATGATGCAAAGATATTCCGGTTTTGCAGATCTAAATGCCACAAGAACTTCAAGATGAAGAGGAATCCTCGCAAAGTAAAATGGACCAAGGCATACAGACGGTTGCATGGAAAGGATATGACACAGGATGAAACCTTTGAGTTTGAGAGGAAGCGAAACAGGCCTGAGAGATATGACAGGAATATTGCGGAGAATACCCTGAAGGCCATTAAGAAGATTGACAAAGTCAGAGTGGATAGGGAGGCCAGACACCACACATTGAGGATGAAGGGGAAGAAAGCTAAGGAGCAGAGGGAGGCGGCCAAGGAGTTGGAGCAGAGCATCCACATGGTCAAAGCTCCTGCTGCACTCCAACAGGAACCATCTCTCACTCTTCCAAAGATCAAAGTCAAGGTTTCCCAACAGCAAGCCGAAGAGAATCGCCCCATGGAAGAGTGA 507 0.4655 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAYRRLHGKDMTQDETFEFERKRNRPERYDRNIAENTLKAIKKIDKVRVDREARHHTLRMKGKKAKEQREAAKELEQSIHMVKAPAALQQEPSLTLPKIKVKVSQQQAEENRPMEE* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00888 168 Gene3D Ribosomal protein L24e 1 68 IPR038630 -
Eupl06g00888 168 FunFam probable ribosome biogenesis protein RLP24 1 67 - -
Eupl06g00888 168 CDD Ribosomal_L24e_L24 1 54 IPR000988 -
Eupl06g00888 168 PANTHER 60S RIBOSOMAL PROTEIN L24 1 167 IPR000988 -
Eupl06g00888 168 SMART 4TRASH 6 44 IPR011017 -
Eupl06g00888 168 Coils Coil 110 130 - -
Eupl06g00888 168 Pfam Ribosomal protein L24e 1 65 IPR000988 -
Eupl06g00888 168 ProSitePatterns Ribosomal protein L24e signature. 8 25 IPR023442 -
Eupl06g00888 168 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 4 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00888 Eupl-Chr6 14397230 14408207 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00888 1 168 Cytoplasmic Ribosomal Protein Gene Family AT2G44860 70.238 1.73e-83 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00888 K02896 - vvi:100250021 321.242