Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00862 ATGGAAACTGAGATGATGGCTGATATGGAGTCTCAGACTCATTCTGCAGACCCAGAAGCTCCGGTCATCTTTAAGAAAGCGAATCGTCCCGTTACGTTGAAGTTCGAAAATGTTGAGTACAAGATTAAAATCAAGAATGATGGATTGTTTATTGCCAAAAACTCAAAATCTGAAGAGAGGCTGATCTTGAAGGGGGTCACAGGCGCAGTGTTACCTGGCGAAATGCTAGCAATGTTAGGCCCATCTGGTAGCGGCAAAACAACCCTCCTGACTGCATTGGGTGGCCGACTCACTGGACAGTTAGACGGAAACATAACCTACAATGGCAATCCCTTCTCCAACCAAATGAAGAGAAACACCGGTTTTGTTACTCAAGATGATGTACTCTATCCTCACCTCACTGTCACTGAAACACTGATCTTCACTGCTCTTCTACGATTACCCAATACAATCAGTAAAGAAGAGAAGATAATGCATGCCGAAACAGTGATTACTCAACTTGGTCTGACCAAGTGCAGGGACAACATTATAGGTGGGCCATTGCTTAGAGGTGTTTCTGGGGGAGAGAGGAAGAGGGTTAGTATTGGACAAGAAATGTTGATAAACCCCAGTCTATTGTTCCTTGATGAACCCACATCGGGTCTCGACTCAACGACAGCTCAACGAATTGTGTCAACATTGTGGGAGTTAGCAAGAGGTAGACGAACTGTGGTGATGACAATACACCAGCCTTCTAGTAGGCTTTTTTACATGTTTCACAAGGTGTTACTGTTATCGGATGGTAACCCTGTGTATTTTGGAAAGGGAGCAGAAGCCATGGATTACTTCTCCAGCATTGGTTACGTCCCATCAGTCGCCATGAATCCATCAGATTTCCTTCTGGATCTTGCAAACGGTGTTTCATTGGATGACTCGGAGGAAGATCAGATGGCTGTGAAGCAAGCCTTGATCTCTGCTTACAAGAGCTATCTTGCTGACAGATTGAACGAGGAGCTGCAGCAAATCGACGATCAATTTCCAGATGGTGCAGAAGATAAGCAGTTTGGCAGATGGAACACAACCTGGGGGCAACAATTTTCTGTGTTGCTCAGAAGGGGTCTAAAAGAAAGGAAGCATGAATCCTTTTCTGGCCTCAAGATTGGTCAGGTCATGGGGGTTGCTGTGCTCGCCGGACTTCTATGGTGGCAATCTGGAATTGCTCATCTACAAGATCAGATTGGGCTTCTTTTCTTCTATTCTGGGTTTTGGGGATTCTTCCCTCTCTTCCAGGCTATCTTCACCTTCCCCCAAGAGCGAATGATGCTTATAAAGGAGAGATCGTCGGGCATGTACAGGCTCTCTTCCTATTTTATTGCCAGGGTCGTGGGTGACCTTCCCATGGAACTTGTCCTCCCCACCATTTTTGTCTCCATAACTTATTGGATGGGAGGGCTGAAGCCCATGGCTGGAAACTTCTTCCAGACCTTGTTTGTGCTCCTCTATAGCGTAATGGTATCTCAAGGCCTCGGTCTCGCTATCGGTGCAATGGTCATGGACCTCAAGTCTGCGACTACACTGGGATCAGTCGTCATGCTCACTTTTCTTCTTGCTGGTGGATTCTACGTGCAACAAGTCCCGGCCTTCATATCATGGACTAAATACATCTCTCTTAGCCACTACACCTACAAACTCTTGCTGGAGTCGCAGTACAAGCCTGACGAAATGTACCAATGTGCGCCAAATGTCAATTGCATCGTCGGGGACTTCCCTACCATACACGAAGTGGGTCTTGACCATAGAATCATCTCCCTTATTGCTTTGGGCATAATGTTTGTGGGTTACAGGCTCATCGCTTATGTTGCCCTCATGAGGCTTGGAGTGACACGTTAA 1869 0.4644 METEMMADMESQTHSADPEAPVIFKKANRPVTLKFENVEYKIKIKNDGLFIAKNSKSEERLILKGVTGAVLPGEMLAMLGPSGSGKTTLLTALGGRLTGQLDGNITYNGNPFSNQMKRNTGFVTQDDVLYPHLTVTETLIFTALLRLPNTISKEEKIMHAETVITQLGLTKCRDNIIGGPLLRGVSGGERKRVSIGQEMLINPSLLFLDEPTSGLDSTTAQRIVSTLWELARGRRTVVMTIHQPSSRLFYMFHKVLLLSDGNPVYFGKGAEAMDYFSSIGYVPSVAMNPSDFLLDLANGVSLDDSEEDQMAVKQALISAYKSYLADRLNEELQQIDDQFPDGAEDKQFGRWNTTWGQQFSVLLRRGLKERKHESFSGLKIGQVMGVAVLAGLLWWQSGIAHLQDQIGLLFFYSGFWGFFPLFQAIFTFPQERMMLIKERSSGMYRLSSYFIARVVGDLPMELVLPTIFVSITYWMGGLKPMAGNFFQTLFVLLYSVMVSQGLGLAIGAMVMDLKSATTLGSVVMLTFLLAGGFYVQQVPAFISWTKYISLSHYTYKLLLESQYKPDEMYQCAPNVNCIVGDFPTIHEVGLDHRIISLIALGIMFVGYRLIAYVALMRLGVTR* 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00862 622 ProSitePatterns ABC transporters family signature. 185 199 IPR017871 GO:0005524|GO:0016887
Eupl06g00862 622 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 19 612 - -
Eupl06g00862 622 FunFam ABC transporter G family member 22 50 279 - -
Eupl06g00862 622 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 280 IPR027417 -
Eupl06g00862 622 Pfam ABC transporter 63 213 IPR003439 GO:0005524
Eupl06g00862 622 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 33 285 IPR003439 GO:0005524
Eupl06g00862 622 SMART AAA_5 72 262 IPR003593 GO:0016887
Eupl06g00862 622 Pfam ABC-2 type transporter 242 308 IPR043926 GO:0140359
Eupl06g00862 622 Gene3D - 41 279 IPR027417 -
Eupl06g00862 622 Pfam ABC-2 type transporter 357 562 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00862 Eupl-Chr6 13891057 13897534 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00862 73 262 Calmodulin-binding Proteins AT2G36910 24.000 7.50e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00862 K05681 - psom:113287650 935.636