Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00861 ATGGCGAAGGAGGAAATGGGAGAGGAGGAAGCAATACTGCAAGGCCAAGCAGATATATGGCAGTACATGTTTGGCTTTGTTGAGTCCATGGCGTTAAAGTGCGCCGTGGAGCTCGGCATAGCGGACATAATAAATTCCCACGGCTGTCCGATTACCTTATCACAAATTGCGGATGGTATCCGTTCTCCTTCTCCAGATATCAATTGCCTCTCTCGTATCATGAGGATGCTAGTGCGTAGACGTGTCTTCATCGCGCAACCCCACCCCAAAGGCGGTGACATCCTCTACGGCCTAACACATTCCTCCAAATGGCTACTTCGAGACGCGGAGCTCAGCCTTGCACCGATGGTGCTAGCAGAGAATCATCCTTGGTTATTGGCCCCATGGCATTACTTGAGCAGATGTGTTGAGGAAGGTGGGATTGCGTTTACAAACGCACACGGCTCAGAGATATGGGACTTCGCTTTGGCAAATCCTGAGTTCAATAAGCTCTTTAATGGGGGCATGGCATGTACAGCCGCCGTCATCGTTAAATCAATCTTGTCCAACTATAAAAACGGATTCGATGGTGTAGGATTGCTCGTCGATGTTGGAGGTGGGACAGGGATGATGATTAGTGAGATTGTGAAGGCATATCCCCATGTACGAGGTATTAATTTTGATCTACCGCACGTAATTGCCACAGCACCCAAGTATCCAGGCGTCGCACACGTCGGAGGGGACATGTTTCTATCTATTCCTACTGCAGATGCTGTCATCATGAAGTGGATAATGCATGATTGGGGTGATGAAGACTGTGTCAAGATCTTAAAAAATTGCCGTAAAGCCATACCAGAGAAGACTGGAAAGGTTATAATTGTGGATTTGGTGTTGCGGCCGGACGGTGAAGGCTTATTTGATGATACGGGATTGGCATTCGATCTTTTAATGGTCGCACACAGCTCTGGTGGGAAGGAAAGGACCGAAGCGGAATGGAAGAAACTATTGGAGCATGGAGGATTCCCTCGCTACAAAATCATCCAAATTCCGGCACTATTGTCCATTATCGAGGCCTATCCAGAGTAA 1065 0.4798 MAKEEMGEEEAILQGQADIWQYMFGFVESMALKCAVELGIADIINSHGCPITLSQIADGIRSPSPDINCLSRIMRMLVRRRVFIAQPHPKGGDILYGLTHSSKWLLRDAELSLAPMVLAENHPWLLAPWHYLSRCVEEGGIAFTNAHGSEIWDFALANPEFNKLFNGGMACTAAVIVKSILSNYKNGFDGVGLLVDVGGGTGMMISEIVKAYPHVRGINFDLPHVIATAPKYPGVAHVGGDMFLSIPTADAVIMKWIMHDWGDEDCVKILKNCRKAIPEKTGKVIIVDLVLRPDGEGLFDDTGLAFDLLMVAHSSGGKERTEAEWKKLLEHGGFPRYKIIQIPALLSIIEAYPE* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00861 354 PIRSF O-mtase 1 354 IPR016461 GO:0008168
Eupl06g00861 354 Gene3D - 2 105 IPR036388 -
Eupl06g00861 354 SUPERFAMILY "Winged helix" DNA-binding domain 10 108 IPR036390 -
Eupl06g00861 354 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 20 353 IPR016461 GO:0008168
Eupl06g00861 354 FunFam O-methyltransferase family protein 107 352 - -
Eupl06g00861 354 PANTHER O-METHYLTRANSFERASE 13 338 IPR016461 GO:0008168
Eupl06g00861 354 Pfam O-methyltransferase domain 129 334 IPR001077 GO:0008171
Eupl06g00861 354 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Eupl06g00861 354 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 352 IPR029063 -
Eupl06g00861 354 Gene3D Vaccinia Virus protein VP39 107 352 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00861 Eupl-Chr6 13880855 13882383 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00861 30 340 Monolignol Biosynthesis Gene Families AT5G54160 41.824 2.01e-82 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00861 K22588 - pvy:116131460 529.25