Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00859 ATGGGAGAGATTGCAAAGGAGGAAGAATTGGGAGATGAGGGATCAATATTGCAAGGGCAAGCAGATATCTGGCAGTTTATGTTTGCCTTTGTTGACTCCATGGCATTAAAGTGCGCCGTGGAGCTCCGCATCGCAGACATAATTAAATCCCACGGTCACCCAATCACCTTATCAAAAATTGCCAGTGGCATTCGCTCTCCTTCTCCGGACATCAATTGCCTCTCTCGTATCATGAGGTTGCTAGTCCGCAGACGTGTCTTCATCGCACAACCCCATGGCGAAAACGGTGACACACTCTACGGCCTCACGCATTCCTCCAAATGGCTACTACGAGATACCGAGCTCAGCCTTGCACCAATGGTGTTAGCCGGGAACCATCCCTGGTTATTGGCCCCATGGCATTACTTGAGCAAATGTGTTGAAGAAGGCGGGACCCCGTTTGCTAAGGCACACGGCTCACAGATCTGGGACTTCGCTTTGGCGAATCCAGAGTTCAATAAGCTCTTTAATGGAAGCATGGCATGTACCGCCACCGTAATCATGAACGCAATCTTGTCCAGCTATAAGGACGGATTCAATGGTGTAAGATTGATCGTCGATGTTGGAGGAGGAACGGGGATGATGGTTAGTGAGATTGTGAAGGTACATCCACATGTACGAGGTATTAACTTTGATCTCCCGCATGTTGTTGCCACAGCACCCGAGTATCCAGGCGTTACACATGTCGGAGGGGACATGTTTCTCTCTATTCCTAGTGCTGATGCTGTCTTCATGAAGTGGATAATGCATGATTGGGGTGATGAAGACTGTGTCAAGATCTTGAAAAATTGCCGTAAAGCCATACCAGAGAAGACTGGAAAGGTCATAATTATGGATTTTGTGTTGCGGCCGGACGGTGAAGGTCTATTTGATGATACTGGATTGGTGTTCGATCTGTTAATGGTCGCACACAGCTCTGGTGGGAAAGAAAGGACTGAAGCCGAATGGAAGAAGGTATTGGACGATGGAGGCTTCCCTCGCTACAAAATCATCCAAATTCCGACTCTACCCTCCATCATCGAGGCATATCCAGAGTGA 1077 0.4828 MGEIAKEEELGDEGSILQGQADIWQFMFAFVDSMALKCAVELRIADIIKSHGHPITLSKIASGIRSPSPDINCLSRIMRLLVRRRVFIAQPHGENGDTLYGLTHSSKWLLRDTELSLAPMVLAGNHPWLLAPWHYLSKCVEEGGTPFAKAHGSQIWDFALANPEFNKLFNGSMACTATVIMNAILSSYKDGFNGVRLIVDVGGGTGMMVSEIVKVHPHVRGINFDLPHVVATAPEYPGVTHVGGDMFLSIPSADAVFMKWIMHDWGDEDCVKILKNCRKAIPEKTGKVIIMDFVLRPDGEGLFDDTGLVFDLLMVAHSSGGKERTEAEWKKVLDDGGFPRYKIIQIPTLPSIIEAYPE* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00859 358 CDD AdoMet_MTases 198 295 - -
Eupl06g00859 358 Gene3D Vaccinia Virus protein VP39 111 356 IPR029063 -
Eupl06g00859 358 SUPERFAMILY "Winged helix" DNA-binding domain 15 112 IPR036390 -
Eupl06g00859 358 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 356 IPR029063 -
Eupl06g00859 358 PIRSF O-mtase 3 358 IPR016461 GO:0008168
Eupl06g00859 358 Pfam O-methyltransferase domain 133 338 IPR001077 GO:0008171
Eupl06g00859 358 Gene3D - 6 109 IPR036388 -
Eupl06g00859 358 Pfam Dimerisation domain 34 82 IPR012967 GO:0046983
Eupl06g00859 358 PANTHER O-METHYLTRANSFERASE 23 342 IPR016461 GO:0008168
Eupl06g00859 358 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 357 IPR016461 GO:0008168
Eupl06g00859 358 FunFam O-methyltransferase family protein 111 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00859 Eupl-Chr6 13864582 13867856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00859 25 344 Monolignol Biosynthesis Gene Families AT5G54160 41.104 2.88e-83 255
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00859 K22588 - csin:114260348 525.783