Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00856 ATGGGGTGCTGTGTTTCGGTCAGCAGTAGCCGGAGTAGCAGTAGTAGCAGAAGCAATGGAGAGAGGATTTCTTCCTCATGCTTTGGTTTGGGATCAAATGGGAGGAGAAAGAAGAGATCATTCTCAGAACATGTTACTACCTTACAACACTTACCTTATATACCCAACCGGATTTTCTCAAATGGCAAGAGCAGAACTTCGTGTATTTTCACTCAGCAAGGACGCAAGGGCATAAACCAGGATGCCATGGTTGTGTGGGAAGATTTTGACTCAGAAGATGCCATCTTTTGTGGTGTCTTTGATGGGCATGGTCCCCACGGCCATCTTGTTGCCCGGAAAGTGAGGGATTCGCTGCCATTGAAGTTGCTCTCATTTCTGCAGTCTCATGAGTCAAGGGGAAATGGGATAAGTAGTAATTGTTTTAAAAGAAAAAATAAATTGGATAGAGGAGATTCTGAGACGAGTGTCTCAACTGAGGATCAACTGGGATCTCTGTGGAGAGAAGCTTTTCTTAAATCATACAGAGCCATGGACAAGGAGCTAAGGTCCCATCCTAGCTTGGACTGCTTCTGCAGTGGCAGCACCGCTGTCACTATAGTGAAACAGGGGTTGAATCTTTTCATGGGAAACATTGGGGATTCTCGGGCAATTTTGGGATCTAAGGACAGCAGCGATGCCATGGTTGCAGTACAGTTGACTGTTGATCTAAAGCCCGACTTGCCAAGGGAAGCTGAACGGATTAAACGGTGTAAAGGAAGGGTCTTTGCATTGCAAGACGAACCAGAAGTGCCTAGGGTTTGGTTGCCATTCGATGATGCACCTGGATTAGCAATGGCTAGGGCATTTGGGGATTTCTGTTTGAAGGATTATGGAGTGATCTCTATACCCGAATTCTCACACAGGGTACTCACTGAGAGGGATCAATTCATTGTTCTTGCATCTGACGGAGTTTGGGACGTATTGAGCAATGAAGAAGTGGTTGAGATCATTTCCTCAGCTCCGACCAGATCTTCAGCTGCACGGATCCTAGTTGATTCAGCTGCTCGGGAATGGAAACTTAAATACCCCACTTCAAAAATGGATGATTGTGCCGTAGTTTGCATGTATTTAGATGGTAAAATTGATTCGGAATCTGACCCAGAGGATCAAGGTATCTCTGCAGCCAATCACATCTATCATTCTTGCACTGCAATTGAATCGGACGAAGGCCAGAACCCAGAACCATCTCTGCAGAGGAACTTTACAGTCAGGTCTGCAGAAGACAGTGATCCAAACAGTAGTATACAAGTTGAGGTTGAAGAAAACGGGGTGAACGCAATAGGTGAAGATCAGAACTGGTCAGGTTTGGAAGGTGTAACCCGAGTCAACTCGCTTGTACAACTTCCTAGATTTTCAGAGGAGAAGCTAAATTCCTGA 1416 0.4548 MGCCVSVSSSRSSSSSRSNGERISSSCFGLGSNGRRKKRSFSEHVTTLQHLPYIPNRIFSNGKSRTSCIFTQQGRKGINQDAMVVWEDFDSEDAIFCGVFDGHGPHGHLVARKVRDSLPLKLLSFLQSHESRGNGISSNCFKRKNKLDRGDSETSVSTEDQLGSLWREAFLKSYRAMDKELRSHPSLDCFCSGSTAVTIVKQGLNLFMGNIGDSRAILGSKDSSDAMVAVQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSHRVLTERDQFIVLASDGVWDVLSNEEVVEIISSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCMYLDGKIDSESDPEDQGISAANHIYHSCTAIESDEGQNPEPSLQRNFTVRSAEDSDPNSSIQVEVEENGVNAIGEDQNWSGLEGVTRVNSLVQLPRFSEEKLNS* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00856 471 Gene3D - 57 372 IPR036457 -
Eupl06g00856 471 PANTHER PROTEIN PHOSPHATASE 36 368 IPR015655 GO:0004722|GO:0006470
Eupl06g00856 471 CDD PP2Cc 72 370 IPR001932 -
Eupl06g00856 471 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Eupl06g00856 471 SUPERFAMILY PP2C-like 51 371 IPR036457 -
Eupl06g00856 471 Pfam Protein phosphatase 2C 157 347 IPR001932 -
Eupl06g00856 471 SMART PP2C_4 55 368 IPR001932 -
Eupl06g00856 471 MobiDBLite consensus disorder prediction 1 23 - -
Eupl06g00856 471 FunFam probable protein phosphatase 2C 52 57 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00856 Eupl-Chr6 13790255 13795308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00856 1 468 PP2C-type Phosphatase Gene Family AT1G03590 68.277 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00856 - - psom:113287646 765.377