Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00846 ATGGGTGTGAGCAGTGGGTTGGGTTTTTTAATAAAGGTTATGAGTTTTCTCAAATGGGTTCTTCTTGCTCTATTGGCTGTGGAGCCTGTTATGGGTGCAAGACATAGAAAATGGTCACATGAGAAGGGGGTAATCAATTTATTGGGAAGTGAGGATCTTGTGACTGACTTGCCCGGCCAACCAGATGTGGGGTTCCGGCACTATGCTGGTTATGTTACCGTCGATGAAATGAATGGCAGAGCACTCTTTTATTGGTTCTACGAGGCGTCGACTCACCCCGATCAGAAACCTTTGGTCCTTTGGCTAAATGGAGGTCCTGGGTGTTCTTCGGTGGGATATGGAGCAACACAAGAGATTGGTCCCTTCATTGTCGACACAGACGGACGTGGACTTAAATTCAATCCGCATTCATGGAATAAAGAAGCCAACATGTTGTTCTTGGAATCTCCAGTTGGAGTTGGCTTTTCATACTCAAACACAACTAGCGATTATAATATTCTTGGAGATGACTTTACAGCGAACGATACATATATTTTCCTGCACAAGTGGTTCATCAAGTTCCCTTCGTATCGAAACCAGAGTTTTTATATTGCAGGGGAGAGCTATGCAGGAAAATATGTTCCCGAGTTAGCTGAGCTCATTCATGACATGAACAAGGATCCTTTCCTATATATTGATCTCAGAGGTTTCTTGTTGGGAAATCCTGAAACATCAGACGGTGAGGACTGGAGAGGGTTGGTGGATTATGCTTGGAGTCACGCTGTTGTATCGGATGAAACTCACAAAATTATCAGAGAGTCCTGCGATTTTGACAGCAACGATACATGGAACAATGACGATTGTGCTCAGGCTGTGGATGAAGTACTCAAACAGTATAGAGAGATCGATATCTATAGCCTCTATACCTCAGTCTGCATGAACACTTCATCGGGTTCTGATGACAAATCAATGCAAGTCATGTTTAAGCCCTCCTCTAAGATGATGCCAAGGATCATGGGTGGTTACGACCCGTGCCTCGACGAACACACAAAAGATTTCTACAACAGACCCAACGTTCAGAAGGCACTCCATGTTAGTGAAGGTCATAACCTCAAGAATTGGCGCATATGCAATAATAAAATATTTAACGAATGGTCAGATTCAAAGCCTTCTGTTCTTCCAATATACAAGAAGCTTATTGCAGCAGGGCTTAGAATTTGGGTCTACAGTGGGGATACAGATGGAAGAGTTCCTGTGTTGTCCACAAGATATAGTTTGAGTGCTTTGGGACTACCAATCACTAGGGCATGGAGGCCTTGGTACCACAAGAAGCAGGTGAGCGGTTGGGTACAAGAGTACGAAGGACTTACATTTGCAACCTTTAGAGGAGCTGGTCATGCAGTGCCAGTTTTCAAACCAAGCAACTCCTTGGCTTTCTTTGCATCCTTCCTTGCTGGTGAATCTCCGGCCTTTGAGCGATGA 1461 0.4435 MGVSSGLGFLIKVMSFLKWVLLALLAVEPVMGARHRKWSHEKGVINLLGSEDLVTDLPGQPDVGFRHYAGYVTVDEMNGRALFYWFYEASTHPDQKPLVLWLNGGPGCSSVGYGATQEIGPFIVDTDGRGLKFNPHSWNKEANMLFLESPVGVGFSYSNTTSDYNILGDDFTANDTYIFLHKWFIKFPSYRNQSFYIAGESYAGKYVPELAELIHDMNKDPFLYIDLRGFLLGNPETSDGEDWRGLVDYAWSHAVVSDETHKIIRESCDFDSNDTWNNDDCAQAVDEVLKQYREIDIYSLYTSVCMNTSSGSDDKSMQVMFKPSSKMMPRIMGGYDPCLDEHTKDFYNRPNVQKALHVSEGHNLKNWRICNNKIFNEWSDSKPSVLPIYKKLIAAGLRIWVYSGDTDGRVPVLSTRYSLSALGLPITRAWRPWYHKKQVSGWVQEYEGLTFATFRGAGHAVPVFKPSNSLAFFASFLAGESPAFER* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00846 486 Gene3D - 385 479 - -
Eupl06g00846 486 FunFam Carboxypeptidase 385 479 - -
Eupl06g00846 486 Gene3D - 338 374 - -
Eupl06g00846 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 146 IPR001563 GO:0004185|GO:0006508
Eupl06g00846 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 183 208 IPR001563 GO:0004185|GO:0006508
Eupl06g00846 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 449 462 IPR001563 GO:0004185|GO:0006508
Eupl06g00846 486 PRINTS Carboxypeptidase C serine protease (S10) family signature 147 157 IPR001563 GO:0004185|GO:0006508
Eupl06g00846 486 ProSitePatterns Serine carboxypeptidases, serine active site. 197 204 IPR018202 GO:0004185
Eupl06g00846 486 Pfam Serine carboxypeptidase 59 478 IPR001563 GO:0004185|GO:0006508
Eupl06g00846 486 Gene3D alpha/beta hydrolase 49 307 IPR029058 -
Eupl06g00846 486 FunFam Carboxypeptidase 48 307 - -
Eupl06g00846 486 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 53 466 IPR001563 GO:0004185|GO:0006508
Eupl06g00846 486 SUPERFAMILY alpha/beta-Hydrolases 51 480 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00846 Eupl-Chr6 13675191 13679807 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00846 343 480 Calmodulin-binding Proteins AT2G22960 32.374 4.83e-17 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00846 K16297 - nnu:104612559 831.632