Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00826 ATGGGTTCTTGGGGGCCAACAATTGAAACTGTGAAGTCAACAATTGAAACTGTGAAGTCAGCAATTGAAATTGTGAAGCCTGTAGTTGCACCCATTGGTGAAAGCTTAAGTTGTCACATCAACCTCGGAAAAAATATGAAAATTTTGGAAAGCAAAGTGGAAGGGCTGAATACCCGAGAGGATGACATAAACACAGAATTGAATCAAGCAGAGGTTCAGGTAGGAAAAAAGCGAAAAAGAGAAGTTGAAGTTTGGCTTGAAAAGACGAGGAGGGTTACAAGTGAAGTGGATGGCATGAAGAAGGAATATAGTGAAAGGGGATATTTCCCAAGTTTAACATTGGGAATGCGTGTTGTAAAGAAGATCAAAGAAGTCACTGAACATCATGAGAAGGGTGAGTTTAATGGTCTGCTAGTTGACACTCTCTTAGACTGTGGAGTGGTATTACCAACAACAGAATTAGTGGGCGAGTCAGCTAAGGAGACCTTGGAAAAAATCTGGGAGGACTTGAAAAAAGATGAGATCAACACGATTGGTGTTTATGGAATGGGGGGAGTTGGCAAGACAACCATCATGACCCATATCAGTAAAAAACAAAAAGAGACTAATCATTTTGGTACTTTAATTTGGGTCACTGTATCAAAAGCAGTGAATGTTGGGAGACTACAAAATGACATCGCAAAAGCAGTCAATTTAGATTTGTCAAATTTTAAAGATCCAATAAAAAGAGCAGCCACATTACAAGACACGTTGAATCGAAGGAAGAGCTTTGTGCTCATCTTAGATGATTTGCGGGAAGCATTTTCTCTGGAAGAGGTAGGAATTCCCATACCTTCTAATGAATGTAAGTTAGTATTGACTACTCAATCATTGGAAGTATGTCGAGAGATGAAATGCCAAAGAAATTTCGAAGTAAAGCTTCTTTCACAGGATGAAGCATGGAACTTATTCATGGATAAAGTTGGCCGTGACATAGTGCTTGCTCCTGAAGTAAAAGCAATTGCAAGGCTCGTTGCCGAGGAATGTGCTTGTTTGCCTCTTACAATCGTCACGGTAGGTAGAGCCATGAGTGGAGTAGATGACATTCGAGAGTGGAGAAACGCATTGAATGAATTGGAAGGATCTACAAGGGGGGTTAGGAATTTGGAGCATAAGGTCGTTAAAAGTCTGAAATTCAGTTATCATCGCTTGAGAGGTGAAAAGCTCAGGAACTGTTTATTACATTGTGCATCGTATCCTGAAGGTGACAAGATCCTGATGGAAGAGTTGATAAAGCTTTGGATTGATCAGGGCTTAATAGATGCTCGAAGTAATAGGCAGGCAATGTTTGATGAAGGTCATGTTATATTGAACATATTAATAAACAATGGCATGTTAGAAAGAGCCAGCAATTATGAGATGTCAACTTGTGTAAAGATGCATGATTCTGTTAGGCGTATGGCCCTCGACATCAGACGTGTGAGCCCTCGATTCATGGTCAATGCTGGTGATCGGTCAGAAGAGCCACCAAATGAGGAGGTACAGAGAGAAGATCTTTAG 1539 0.4055 MGSWGPTIETVKSTIETVKSAIEIVKPVVAPIGESLSCHINLGKNMKILESKVEGLNTREDDINTELNQAEVQVGKKRKREVEVWLEKTRRVTSEVDGMKKEYSERGYFPSLTLGMRVVKKIKEVTEHHEKGEFNGLLVDTLLDCGVVLPTTELVGESAKETLEKIWEDLKKDEINTIGVYGMGGVGKTTIMTHISKKQKETNHFGTLIWVTVSKAVNVGRLQNDIAKAVNLDLSNFKDPIKRAATLQDTLNRRKSFVLILDDLREAFSLEEVGIPIPSNECKLVLTTQSLEVCREMKCQRNFEVKLLSQDEAWNLFMDKVGRDIVLAPEVKAIARLVAEECACLPLTIVTVGRAMSGVDDIREWRNALNELEGSTRGVRNLEHKVVKSLKFSYHRLRGEKLRNCLLHCASYPEGDKILMEELIKLWIDQGLIDARSNRQAMFDEGHVILNILINNGMLERASNYEMSTCVKMHDSVRRMALDIRRVSPRFMVNAGDRSEEPPNEEVQREDL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00826 512 Coils Coil 46 73 - -
Eupl06g00826 512 Gene3D - 140 305 IPR027417 -
Eupl06g00826 512 FunFam Probable disease resistance protein At1g63360 394 483 - -
Eupl06g00826 512 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 47 486 - -
Eupl06g00826 512 Pfam NB-ARC domain 160 394 IPR002182 GO:0043531
Eupl06g00826 512 Gene3D - 307 398 IPR042197 -
Eupl06g00826 512 FunFam Probable disease resistance protein At1g61300 148 302 - -
Eupl06g00826 512 PRINTS Disease resistance protein signature 342 356 - -
Eupl06g00826 512 PRINTS Disease resistance protein signature 251 265 - -
Eupl06g00826 512 PRINTS Disease resistance protein signature 177 192 - -
Eupl06g00826 512 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 409 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00826 Eupl-Chr6 13346085 13366188 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00826 174 451 WRKY Transcription Factor Family AT5G45050 21.212 4.96e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00826 K13459 - msin:131235532 456.832