Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00783 ATGTCGTCTTTGACGAAGATCTGCTTCAATCCGGACTGTAAAGATGCGAAATCGGAGTGCTCAAGGAAAGGATGGCGGCTTCGAACCGGGGATTTTGCTGAGCTTTGCGATCGATGCGCTTCTGCATTTGAGGAAGGGAGATTCTGTGAAACATTTCACTCAGATGCTGCTGGTTGGAGGAGCTGTGAGTCTTGTGGAAAGCGGGTACACTGCGGATGTATTGTTTCAATCCATGCGTTTGTTCTACTGGATGCTGGAGGAGTTGATTGCATGTCATGTGCTAGGAAAAACTTCTTTATGGCTTCGAACCAGATATGGCCACCTTCTTTGTTTTCACTTCCCGAGAGACTTAAAGACCTTAAACACTGGAATCCAATTTCTGGGTCAAGTGCAGTTGCTGGACAACGGTGGCAACCATCCAATTTATGGAATACTGCTAATGCTCAGTCTGAATTGCATCCACGGATGCCCTATGAAGTTGACAGATCAAATGGCATTGAAAAATTAATTTCCGGGGAGTGCTCATCTGCCTCTGCCCTGGAAAAGAAGAAACTTGAAGATCAATGTGAAAGAATTAAATCTTGCAACTTCAACCTTGCTGCACTAGATAGACTTGCAAATGGGAATGCCGGTGTTGACACAGTGACTGCATTTAACACCTTCCATAGGGAAGAAGGGAATCTAAATGGCTTGCAAGGCTCATGTCGCCTTACAGGAGAATATGATTCAGTGGATACTAGTAAAGGAGTGATTGCTGAACCTGTCTTGAACACTTCTGCTGCAGGAATGATCTATGAAGCACATCCTAATTCACGTGTAAATATTTCACTGCAGTCATCCACTTCAAAGGATGATCCATCAACTCCACATTTTGGTTTGGCTGCACCTTATTCATCACCTAATGAGACAATTGGTCCAACCAAGGTTTCTGGAATTCAGTCACGGCAAACCCCTCCACCTCCATTGGCCAAGCAATTCTATGCTAATATGCACAATGGAGTGGACCCATCTAGCGAAAGTCAAATTCGCAATGGAAGACCTCGAGGGGATGCCCGGGGACGAAATCAGTTACTTCCTCGATACTGGCCTCGGATAACTGATCAAGAACTACAACAAATCTCAGGAGACTCAAATTCTGTCATCACGCCTTTGTTTGAGAAGATGTTAAGTGCTAGTGATGCTGGTCGGATAGGTCGTTTAGTGCTGCCAAAAAAATGTGCAGAGGCTTATTTCCCTACAATTTCTCAGCCAGAAGGATTACCTCTAAAAGTTCAGGATGCAAGAGGCAAGGAGTGGATATTTCAATTCCGCTTTTGGCCCAATAATAACAGCAGGATGTATGTTTTAGAGGGGGTTACAACTTGCATTCAGTCAATGCAATTGCAAGCAGGTGACACAGTAACATTCAGTCGGATAGATCCAGAAGGAAAGTTGGTCATGGGATTCAGAAAGGCTTCAAGTGTTCCACCATCTGACCAGGACAATCAAATGTTTAAGACTGCGAACGGTGTCTCCACAAGTGCAGAGGTTAATAATAGAAAATCTAAACCTAGTGAAGTTGTTTCTACTCCTCTTCGTCCTTTAAAGAGTAGTGCAGAATCAACTAGTTATTCATCAATAAACCAGGTAAATGCGGCAGATCTGGCAAGTGCATGGTCTAAAGTTGATAAATCAGGTTATATAGCAAAAGAAGTGCCTGGGGCTAAGTCTTCCCTCCCCCCTAGTAAGAGGAAAAGTAGCACCCTTGGTTCAAAGAGCAAACGCCTGCGCATAGAGAATGAGGACTTAATAGAGCTCAAGCTTACATGGGAAGAAGCTCAAGGGCTGCTCCGTCCGCCTCCTAACCATGTTCCCAGTGTCGTGGTAATTGAAGGACATGAATTTGAGGAATATGAGGAAGCACCGGTACTGGGGAAGCCTACAATTTTGACTATCAGTCATGTTGGTGAAAAGATTCAATGGGTTCAGTGTGAAGACTGTTCCAAGTGGCGCAAACTGCCTGTCGATGCACTTCTTCCCTCACGATGGACCTGTTCTGACAACTCGTGGGATCTCAAGAGGTCTTCGTGTTCATCAGCTCAAGAATTAACTAAAGAACAGCTTGAAGATCTGCTTTCATCTAATAATACTGCAGGTGCAACCAAGAAAACTAAGGTCCCTAAAAAGGACAGGGATGCTGTTGAAGCATCAGAGGGGCTCGACACTCTTGCCAACCTTGCTATCCTAGGAGAGAGTGAGGCCCTCCCTCCCTCAGCTCCCACCACGAAACATCCTCGCCATCGGCCCGGGTGCAGTTGCATTGTCTGCATCCAGCCCCCAAGCGGGAAGGGTCCCAAGCACAAGGATACATGCACATGCAATGTCTGTCTTACTGTGAAACGCCGCTTCCGCACCCTCATGCTGCGTCGTGAGAAGCGGCAGTCAGAGAAGGAAGCAGAGACTGCCAGGAAGAAGCAGCAACTATTCCAACTGCCTGAGAAAGCAGAGCAAGAGGATGATCCACTGTTGAATAGTAACACAAGCAACAGTGGCTCAGACCAGAAAATGGTGGTTGGTGATACTGCCAATGGTGATCCTAACAGGAAAAAACCGTTGTCGTCACCTTTTAAAGGTCAGATTGACCTGAACATCAAGCCAGAGCGGGAGGATGAACCATCACCTGTATCAGATTCTGGCAGCACGATGAAGCATCTCCAAGATGGCACTGACAACTATCCAAGCCCGCAGAAGCTGGCAAATTTGCCTGGCAACAAAGATGCTGGAGGAGGTGGAGTTGGAGCAGTAGTTGAGAATTTGGACAGTGGCGTTCCAGATGCTGACATGGACCGCCCTGTCACTCTATCTTTGTCTATGTCAGCTTCCACGGTAGCAACTGGCTAA 2880 0.4632 MSSLTKICFNPDCKDAKSECSRKGWRLRTGDFAELCDRCASAFEEGRFCETFHSDAAGWRSCESCGKRVHCGCIVSIHAFVLLDAGGVDCMSCARKNFFMASNQIWPPSLFSLPERLKDLKHWNPISGSSAVAGQRWQPSNLWNTANAQSELHPRMPYEVDRSNGIEKLISGECSSASALEKKKLEDQCERIKSCNFNLAALDRLANGNAGVDTVTAFNTFHREEGNLNGLQGSCRLTGEYDSVDTSKGVIAEPVLNTSAAGMIYEAHPNSRVNISLQSSTSKDDPSTPHFGLAAPYSSPNETIGPTKVSGIQSRQTPPPPLAKQFYANMHNGVDPSSESQIRNGRPRGDARGRNQLLPRYWPRITDQELQQISGDSNSVITPLFEKMLSASDAGRIGRLVLPKKCAEAYFPTISQPEGLPLKVQDARGKEWIFQFRFWPNNNSRMYVLEGVTTCIQSMQLQAGDTVTFSRIDPEGKLVMGFRKASSVPPSDQDNQMFKTANGVSTSAEVNNRKSKPSEVVSTPLRPLKSSAESTSYSSINQVNAADLASAWSKVDKSGYIAKEVPGAKSSLPPSKRKSSTLGSKSKRLRIENEDLIELKLTWEEAQGLLRPPPNHVPSVVVIEGHEFEEYEEAPVLGKPTILTISHVGEKIQWVQCEDCSKWRKLPVDALLPSRWTCSDNSWDLKRSSCSSAQELTKEQLEDLLSSNNTAGATKKTKVPKKDRDAVEASEGLDTLANLAILGESEALPPSAPTTKHPRHRPGCSCIVCIQPPSGKGPKHKDTCTCNVCLTVKRRFRTLMLRREKRQSEKEAETARKKQQLFQLPEKAEQEDDPLLNSNTSNSGSDQKMVVGDTANGDPNRKKPLSSPFKGQIDLNIKPEREDEPSPVSDSGSTMKHLQDGTDNYPSPQKLANLPGNKDAGGGGVGAVVENLDSGVPDADMDRPVTLSLSMSASTVATG* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00783 959 SUPERFAMILY DNA-binding pseudobarrel domain 382 484 IPR015300 -
Eupl06g00783 959 MobiDBLite consensus disorder prediction 277 300 - -
Eupl06g00783 959 ProSiteProfiles Zinc finger CW-type profile. 648 698 IPR011124 GO:0008270
Eupl06g00783 959 FunFam B3 domain-containing transcription repressor VAL1 363 489 - -
Eupl06g00783 959 Pfam B3 DNA binding domain 385 484 IPR003340 GO:0003677
Eupl06g00783 959 MobiDBLite consensus disorder prediction 801 943 - -
Eupl06g00783 959 MobiDBLite consensus disorder prediction 834 850 - -
Eupl06g00783 959 MobiDBLite consensus disorder prediction 565 585 - -
Eupl06g00783 959 MobiDBLite consensus disorder prediction 334 354 - -
Eupl06g00783 959 MobiDBLite consensus disorder prediction 802 833 - -
Eupl06g00783 959 Gene3D - 363 488 IPR015300 -
Eupl06g00783 959 MobiDBLite consensus disorder prediction 888 911 - -
Eupl06g00783 959 CDD B3_DNA 383 484 IPR003340 GO:0003677
Eupl06g00783 959 MobiDBLite consensus disorder prediction 703 727 - -
Eupl06g00783 959 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 5 909 - -
Eupl06g00783 959 Gene3D - 652 706 - -
Eupl06g00783 959 MobiDBLite consensus disorder prediction 504 534 - -
Eupl06g00783 959 ProSiteProfiles B3 DNA-binding domain profile. 385 486 IPR003340 GO:0003677
Eupl06g00783 959 SMART B3_2 385 486 IPR003340 GO:0003677
Eupl06g00783 959 Pfam CW-type Zinc Finger 653 695 IPR011124 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00783 Eupl-Chr6 12641164 12677733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00783 313 806 B3 DNA Binding Superfamily AT4G32010 53.414 3.10e-161 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Eupl06g00783 B3 2.1e-16 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00783 K09287 - msin:131236254 1283.47