Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00777 ATGTTGTGGATAGTTCTGCTTGAGAAGTCAAGAGTGGTTCAGCTGGCTAAGGGGGAAAGATCATACCATATCTTTTATCAACTTTGTGCTGGTGCTCCATCCTTTCTTAAAGAGAGGTTGAACCTGAAAGCGGCCAGTGAGTACGACTATCTTAAGCAGAGCGATTGCTTGACAATTGATGATGTTGATGATGCTCTAAGATTTCATAAGCTGATGGAAGCCTTAGATATTGTTCAACTTGGCAAAGAAGAGCAAGAGAACACATTTGCTATGCTTGCTGCGGTGTTATGGTTGGGAAACATTTCCTTTCAAGTAATTGACAATGAAAATCATGTGGAAGTTGTGACAGACGAAGCTGTAACTAATGCTGCCAAGTTGATGGGTTGCAACGTTCGGGACCTGATGTTAGCGTTATCTACTCGTCGAATCCAAGCTGGCAATGATATCATTGTCCAAAAGTTAACTTTGCCGCAGGCCATTGACACGAGGGACGCATTGGCAAAATTTGTCTATGCAAGCTTGTTTGACTGGCTTGTGGAACAAATCAATAAGTCACTTGAAGTAGGCAAACGGCGTACAGGGAGATCCATAAGTATCCTTGATATCTATGGGTTTGAATCATTTCAGAAGAACAGCTTTGAACAGTTTTGTATAAATTATGCAAATGAGAGGCTGCAACAGCATTTCAATCGGCATCTGCTCAAACTCGAACAGGAGGAGTACTCACAAGATGGGATTGATTGGACGAAAGTTGATTTTGAAGACAACCAGGAATGTCTAAATCTCTTTGAGAAGAAACCGTTAGGGCTACTGTCTTTATTGGATGAGGAATCAACTTTTCCCAAAGCCACTGATTTGACCTTTGCTAATAAGCTTAAGCAGCACTTGAATGCTAATCCCTGCTTCAAAGGGAAAAGGGATGGGGCTTTCAGTGTTTGTCATTATGCTGGAGAGGTTTTATATGACACAACTGGCTTCTTGGAGAAGAACAGAGATCCACTGCACTCTGATTTCATCCAACTTCTCTCGTCATGCAGTTGCCAACTACCTCAGTTATTTGCCTCCAACATGCTTAATCCATCCTGGAAGCCAGTGAGTCCTTTGTGGCGGCTTGGTGCAGCTGATTCCCAGAAACAAAGTGTTGGGGTGAAGTTCAAGGTTCAACTGTTCAAACTGATGCAGCGGTTGGAGAACACCACACCCCACTTCATTCGTTGCATAAAGCCAAACAGTAAGCAACATCCTGGATGTATGAGAAGGATCTTGTATTGCAGCAGCTCAGATGCTGTGGAGTCTTGGAGGTACGAGTTTCTTCTTTTGGAGAATGTTGTATCTCAAGATCCATTAAGTATATCGGTCGCCATTCTTCAGCAGTTTAATGTCCATCCTGATATGTATCAAGTTGGTTACACAAAGTTATTTTTCCGAACAGGGCAGATTGGTGCATTGGAAGATGCAAGAAAACGAACGCTGCAAGGTATACTTGGGGTTCAAAAATGCTTCCGTGGTCACCAAGCTCGCTGTCGCTTCCATGAGCTGAAGAGAGGGATAACTACTCTGCAATCTTTTGTCCGTGGTGAAAATGCAAGAAAGGAATATCAGCTTTTGATAAAGAGGTGGAGAGCAGTTCTCATACAGCAGAATATGAAGCAACAGATTGTTAGGAGAACACTCAACGATTGGGAGTGGGCAGTCATATCTTTGCAGTCTGTAATCCGTGGTTGGTTGGCTAGAAGGCATTTTCACAGTTTGCAGAATCTGGAAAAATCAAATCTTGACAGCACAACAGCTAAAAAGTGGCCAGACCGGAAAATTCCAGAACTGCAGGACTCGGAGCAGGGGCATGTTGAGGTTCAGTCTTCAGATTTGGCAGAGCTTCAAAGGCGACTTCTGAAGGCGGAAGCAGCACTGGGACAAAAGGAAGAGGAAAATGCTGTATTGCAGCAGCAGCTTAAACAATTCGAGACGAGGTGGTCGGAGTATGAGGTAAAGATGAAATCCATGGAGGAGATGTGGCAAATACAGATGGCATCTTTACAGATGAGTCTAGCTGCAGCAAAGAAGAGTCTCATTGCTGATGACACTGCTGGCCAACCTGGAAGGCCCGATGCTTCCCCAGTCCCTCACTATTATGATTCTGAGGATACATTGTCCATGGAGACCCGCACTCCTGAATGCAGCACACCAGCAAAATTAGATTCCACTTCTGATGCTGTACCAGGGCGAGAGTCTAACAGTGGTCTCAACGCAGTCAGCCATCTGGTGAAGGAGTTTGAGCAGCGGAAACAGGACTTTGATGGTGATGCAGGGTTCCTCATTGAGGTCAAATCAGGGCAAACAGCTTCAACTATCAATCCTGACGACGAGCTACGGAAGCTGAAGCTCAGGTTTGAGGCGTGGAAGAAAGAATACAAAGTTAGGTTGAGGGAGACAAAGGCAACACTTCAGAAACTTGGACATTCAGAAGTGGAGAAGACTCGTAAGAAATGGTGGGGGATGAGGAGCACGAGAGGAACATAG 2520 0.446 MLWIVLLEKSRVVQLAKGERSYHIFYQLCAGAPSFLKERLNLKAASEYDYLKQSDCLTIDDVDDALRFHKLMEALDIVQLGKEEQENTFAMLAAVLWLGNISFQVIDNENHVEVVTDEAVTNAAKLMGCNVRDLMLALSTRRIQAGNDIIVQKLTLPQAIDTRDALAKFVYASLFDWLVEQINKSLEVGKRRTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLLKLEQEEYSQDGIDWTKVDFEDNQECLNLFEKKPLGLLSLLDEESTFPKATDLTFANKLKQHLNANPCFKGKRDGAFSVCHYAGEVLYDTTGFLEKNRDPLHSDFIQLLSSCSCQLPQLFASNMLNPSWKPVSPLWRLGAADSQKQSVGVKFKVQLFKLMQRLENTTPHFIRCIKPNSKQHPGCMRRILYCSSSDAVESWRYEFLLLENVVSQDPLSISVAILQQFNVHPDMYQVGYTKLFFRTGQIGALEDARKRTLQGILGVQKCFRGHQARCRFHELKRGITTLQSFVRGENARKEYQLLIKRWRAVLIQQNMKQQIVRRTLNDWEWAVISLQSVIRGWLARRHFHSLQNLEKSNLDSTTAKKWPDRKIPELQDSEQGHVEVQSSDLAELQRRLLKAEAALGQKEEENAVLQQQLKQFETRWSEYEVKMKSMEEMWQIQMASLQMSLAAAKKSLIADDTAGQPGRPDASPVPHYYDSEDTLSMETRTPECSTPAKLDSTSDAVPGRESNSGLNAVSHLVKEFEQRKQDFDGDAGFLIEVKSGQTASTINPDDELRKLKLRFEAWKKEYKVRLRETKATLQKLGHSEVEKTRKKWWGMRSTRGT* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00777 839 ProSiteProfiles IQ motif profile. 492 519 IPR000048 GO:0005515
Eupl06g00777 839 SMART iq_5 560 582 IPR000048 GO:0005515
Eupl06g00777 839 SMART iq_5 489 511 IPR000048 GO:0005515
Eupl06g00777 839 SMART iq_5 512 534 IPR000048 GO:0005515
Eupl06g00777 839 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 541 IPR027417 -
Eupl06g00777 839 FunFam Myosin IE heavy chain 77 185 - -
Eupl06g00777 839 FunFam Myosin heavy chain 20 76 - -
Eupl06g00777 839 Gene3D - 20 78 - -
Eupl06g00777 839 Gene3D - 213 399 - -
Eupl06g00777 839 MobiDBLite consensus disorder prediction 720 745 - -
Eupl06g00777 839 Gene3D - 540 588 - -
Eupl06g00777 839 Gene3D - 494 539 - -
Eupl06g00777 839 Pfam Myosin head (motor domain) 6 418 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl06g00777 839 ProSiteProfiles Myosin motor domain profile. 1 416 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl06g00777 839 Pfam IQ calmodulin-binding motif 515 534 IPR000048 GO:0005515
Eupl06g00777 839 Pfam IQ calmodulin-binding motif 495 511 IPR000048 GO:0005515
Eupl06g00777 839 Pfam IQ calmodulin-binding motif 563 582 IPR000048 GO:0005515
Eupl06g00777 839 PRINTS Myosin heavy chain signature 249 277 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl06g00777 839 PRINTS Myosin heavy chain signature 196 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl06g00777 839 Coils Coil 616 657 - -
Eupl06g00777 839 ProSiteProfiles IQ motif profile. 562 590 IPR000048 GO:0005515
Eupl06g00777 839 Gene3D - 432 486 - -
Eupl06g00777 839 ProSiteProfiles IQ motif profile. 513 542 IPR000048 GO:0005515
Eupl06g00777 839 SMART MYSc_2a 1 489 IPR001609 GO:0003774|GO:0005524|GO:0016459
Eupl06g00777 839 Gene3D Myosin VI head, motor domain, U50 subdomain 81 212 - -
Eupl06g00777 839 PANTHER MYOSIN 5 828 - -
Eupl06g00777 839 FunFam Unconventional myosin-XIX 208 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00777 Eupl-Chr6 12520590 12536034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00777 2 835 Myosins gene family AT5G54280 59.838 0.0 1014
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00777 K10357 - msin:131236414 1240.33