Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00755 ATGGGTGAAGAGAAGGTAGATGATGATGAAGAGGAGAACAGCTTGTGGGAATTATCCACCGGAGAATCCATTCTCCTACGAGCTATCAAACTTATATCTTCTCTAATATCTCTTTCTCATTCAGTCAAAGTGTTTCATCTAAAATGGCAGTTGATCAGAAATAAACTCGAGGAGCTGAATTCTGGCCTAACTGCTGCTGAGAATTGTGATTCACATGGGATTTCAGCCGTCTCGAAGTTAATTCCGGCTATATTAGTGACTGTTAAGGAATGTTATGATCTTGCACGGCGATGCGTTAACCTTTCCTATAGTGGGAAGCTACTTATGCAGAGCGACATCGATATTATCTCTGCGAAGCTTGAGGTTCATCTTAAGAATCTAGCAAGAATTTACACTGCTGGAATTCTTTCTCATGGTAATGCGATTGTCGTGTCGAGGCCTAGTATTGGAGCTTGTCGCGATGACATGAAGTTCTACGTCAGGGACTTATTGACGAGGCTGAAGATTGGAGGTTCTGAGATGAAAAGAAGGGCCTTAATGGCCTTGAATGAGGTAATTGTGGAAGACAAAAAATATGTGTGGATTGTTGCCGAGATGGATGAAATTATTAGTCTCTTGGTGAATTTTCTCGAATTCGAAGATAAAAGGATTCAAGAAGAGTCTGCAAAGGTGATTTCGGTGATTGCAGGATTCGATCCTTATAAAGGTGTTCTCATTGGAGCTGGAATTATGGGACCGTTGATTCGGGTTTTGGAGTCAGGAAGTGATTTGGCAAAAGAAAGAGCAGCAAGAGCTCTGCAGAAACTGACAGAGAATTCAGAAAATGCTTGGTCGGTTTCTGCTCATGGTGGAGTAACAGCAGTGTTAAATATCTGCACTAAGGGTGATGGCAAAGGAGAGTCAATTGGTCCAGCTTGTGGGGTTCTAAAGAATCTTGTCGGAGTAGAAGAGATCAAGCGATTCATGGTCGAAAAAGGTGCAGTCTCGGCCTTCGTCAAGCTTCTGAGATCGAAATATGAAGCCTTGCAGATGAACGCAGTTGAGTTTCTCCAAATCATGGCTTCAGGAGACGAAAACATCCGTCGAATGATCATCAGAGAGGGGGGGAACCTACTCACTTGTTCAAATATTGGATCCTAA 1140 0.4272 MGEEKVDDDEEENSLWELSTGESILLRAIKLISSLISLSHSVKVFHLKWQLIRNKLEELNSGLTAAENCDSHGISAVSKLIPAILVTVKECYDLARRCVNLSYSGKLLMQSDIDIISAKLEVHLKNLARIYTAGILSHGNAIVVSRPSIGACRDDMKFYVRDLLTRLKIGGSEMKRRALMALNEVIVEDKKYVWIVAEMDEIISLLVNFLEFEDKRIQEESAKVISVIAGFDPYKGVLIGAGIMGPLIRVLESGSDLAKERAARALQKLTENSENAWSVSAHGGVTAVLNICTKGDGKGESIGPACGVLKNLVGVEEIKRFMVEKGAVSAFVKLLRSKYEALQMNAVEFLQIMASGDENIRRMIIREGGNLLTCSNIGS* 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00755 379 Gene3D - 159 299 IPR011989 -
Eupl06g00755 379 Gene3D - 300 378 IPR011989 -
Eupl06g00755 379 SMART arm_5 314 355 IPR000225 GO:0005515
Eupl06g00755 379 SMART arm_5 189 230 IPR000225 GO:0005515
Eupl06g00755 379 SMART arm_5 231 271 IPR000225 GO:0005515
Eupl06g00755 379 SUPERFAMILY ARM repeat 160 367 IPR016024 -
Eupl06g00755 379 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 326 369 IPR000225 GO:0005515
Eupl06g00755 379 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 17 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00755 Eupl-Chr6 12239869 12241008 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00755 143 369 U-box Gene Family AT2G23140 28.384 2.24e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00755 - - nnu:104605697 500.36