Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00744 ATGGCAGTTGGTAATAATATCGGGTATTTTTGGATGAATTGGGCCATGAGGTTTCTCGGGTCCTTTGATTGGTGGATTACTGTTCTCCTTTTTCTTGCTATTACATTTCTTGCAATGGCAGATGGTCATGAGACTGATAAGAACATTGAGATATGGAAGATCAAGAAATTGATCAAAGCACTGGAAGCTGCCAGAGGCAATGGTACTAGCATGATTTCTCTTATCATGCCTCCCCGTGATCAGATATCTCGGGTCACTAAGATGTTGGGCGATGAATTTGGTACTGCTTCAAACATTAAAAGCAGAGTTAATCGTCAGTCAGTGTTGGGTGCCATCACCTCTGCTCAGCAGAGGCTGAAGCTTTACAATAAGGTTCCTCCCAATGGTTTGGTGCTATACACTGGAACCATTGTGACTGACGATGGGAAGGAAAAGAAGGTCACGATTGATTTTGAGCCTTTCAAGCCCATAAATGCATCACTTTACCTCTGTGATAACAAGTTCCATACAGAGGCTCTGAATGAACTCTTAGAATCCGATGATAAGTTTGGCTTTATAGTCATGGATGGGAATGGTACCCTTTTTGGGACATTAAGTGGCAACACCCGTGAAGTCCTTCACAAGTTCACTGTTGATCTCCCAAAGAAGCATGGTAGAGGAGGACAGTCTGCTCTTCGATTTGCTCGACTTCGGATGGAGAAACGCCACAATTATGTGAGGAAAACAGCCGAGCTCGCCACACAGTTCTTCATCAATCCAGCCACCAGCCAGCCCAATGTTGCAGGATTAATCCTTGCTGGTTCTGCTGACTTCAAGACAGAGCTGAGCCAGTCCGATATGTTTGATCCGCGTCTCCAGGCTAAGATACTGAACGTGGTTGATGTTTCTTACGGAGGTGAGAATGGTTTCAATCAGGCCATTGAGCTGTCCTCAGAGATTCTATCCAATGTGAAATTCATTCAGGAGAAGCGCTTGATTGGGAAGTACTTTGAGGAGATCAGCCAGGATACTGGGAAGTATGTATTCGGTGTGGATGACACGCTGAAAGCACTGGAAATGGGTGCAGTCGAGACGCTCATTGTATGGGAAAATCTGGATATTAACAGATACGTGTTGAAGAACAGCGTTACTGGTGAAATAATCATAAAGCACTTGAACAAGGATCAAGAGGCCGACCAGAGCAACTTCCGGGATCCAGCTGCCTCAGCAGAATTGGAGGTTCAGGAAAAGATGGCACTGCTGGAGTGGTTTGCCAATGAGTACAAGCGGTTTGGTTGCACTCTTGAGTTTGTCACCAATAAATCCCAGGAGGGCTCCCAGTTCTGCAGAGGGTTTGGTGGCATGGGTGGTATCCTCCGTTACCAGCTTGATATGAGATCGTTTGATGAGCTGTCTGATGACGGAGAAGTTTATGGAGATTCTGATTAG 1428 0.4552 MAVGNNIGYFWMNWAMRFLGSFDWWITVLLFLAITFLAMADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDINRYVLKNSVTGEIIIKHLNKDQEADQSNFRDPAASAELEVQEKMALLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGMGGILRYQLDMRSFDELSDDGEVYGDSD* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00744 475 Gene3D eRF1 domain 2 174 315 IPR042226 -
Eupl06g00744 475 Gene3D eRF1 domain 1 37 173 IPR024049 -
Eupl06g00744 475 Gene3D - 317 475 IPR029064 -
Eupl06g00744 475 FunFam Eukaryotic peptide chain release factor subunit 1 174 315 - -
Eupl06g00744 475 SUPERFAMILY L30e-like 316 458 IPR029064 -
Eupl06g00744 475 FunFam Eukaryotic peptide chain release factor subunit 1 40 173 - -
Eupl06g00744 475 Pfam eRF1 domain 3 319 456 IPR005142 -
Eupl06g00744 475 SMART eRF1_1_2 42 178 IPR005140 -
Eupl06g00744 475 Pfam eRF1 domain 1 56 176 IPR005140 -
Eupl06g00744 475 Pfam eRF1 domain 2 182 315 IPR005141 -
Eupl06g00744 475 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 44 178 IPR024049 -
Eupl06g00744 475 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 43 467 IPR004403 GO:0003747|GO:0006415
Eupl06g00744 475 SUPERFAMILY Translational machinery components 180 314 - -
Eupl06g00744 475 FunFam Peptide chain release factor subunit 1 317 475 - -
Eupl06g00744 475 NCBIfam peptide chain release factor aRF-1 50 455 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00744 Eupl-Chr6 12127226 12142684 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00744 39 475 Eukaryotic Initiation Factors Gene Family AT3G26618 91.762 0.0 828
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00744 K03265 - msin:131239554 838.18