Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00742 ATGCGAGGTTCATCCTTCTTCGGCCAAGCTTCGAGAGCTCTCAACGACTCCCCTGCCTTCTCTAAGCTGCTCATTCTCTTCACTATCAGTAGCGGAGGTGTCGTGGCATACTCGGAGTCACAGTCAGATAACCATGGTGCACGTACTGTTGAATCAATATCTCCAACAGATGCAAAGAAGAAGAGGGTAGTGGTGCTCGGAACTGGGTGGGCTGGCACAAGCTTCCTGAAAAATCTAGATGTTTCCTCATATGATGTTCAGGTGGTGTCACCCCGTAATTATTTTGCATTTACACCATTGTTACCAAATGTCACTTGTGGGATGGTGGAAGCACGCAGCATCGTAGAGCCCATTCGGAATATTTTAAACAAGAATAGTGGAGAAATTCAATTTTGGGAAGCAGAGTGCATCAAGATTGATCCAGTAAACAAAAAAGTTGTGTGTCGATCTAATGATGACCATTTGGTAGGGAAAGGCGATTTTCAACTGGGCTATGATTATTTGATTGTAGCTTTAGGAGCCCAAGTAAATACTTTTAACACTTCTGGCGTCATGGAGAATTGCCATTTTATGAAGGAAATAGAGGATGCTCAGAGGATCCGTAGGAGTGTGGTAGATTGTTTTGAAAGGTCTTTCCTTCCAAGCTTAAGTGAAGAAGAAAGAAGGACAAACCTTCATTTTGTAATCGTTGGTGGGGGTCCTGCAGGTGTGGCATTTGCTGCAGAGCTGCACGACTTTATCCAAGAAGATCTAGTCAAGTTATATCCTATGGTTCAAGACCTAGTGAAAATTACTTTGGTCCACTCGGGAGATCATATCTTGAACACGTTTGATGAAAGAATTAGTTCATTTGCTGAACAGAAGTTTCAAAGAGATGGTATTGAAGTGAAAACAGGATGTCGGGTTGTAAGTGTGTCTGACAAGTTGATTACTATGAAGGAGAAATCAAAGGGAGAGATTGCTTCTATGCCATATGGAATGGTTGTATGGTCTACTGGTATCAAGACACGCCCTGTTGTAAGGGACTTTATGGGACAAATTGGTCAGAGTAAAAGACTTGTTTTAGCAACTGATGAATGGCTGCGAGTCGAGGGATGTGACAACGTGTATGCCCTTGGTGACTGTGCTACTATTAAGCAACGTAAAATCATGGAAGATATTTCAAAGATTTTTAATGCTGCTGACAAAGACAAGTCTGGTAACTTAACTGTAAAAGAATTCCAAGATGTCATCGACGACATCCTAGTAAGGTATCCGCAAGTGGGGCTCTATTTAAAGAATAAGCATCTACGCAACGTGACAGATCTGTTGAAGGAGTCCCAATGGAATGATAAGAAGGAAATTAGTATTGAGGGGTTCAAATCGATGCTTTCACATGTGGATTCACAGATGAAAAGTCTTCCTTCAACTGCTCAGGTTGCCACTCAACAAGGCACATATCTTGCTAGTTGCTTTAACCGTATGGAGGAATGCAAAGCTAATCCAGAAGGTCCTCTTATTTTTGGAGAATCTGGTCGTCATCAATTCCGTCCATTTTGGTACAAGCATTTGGGGCAATTTGTTCCTTTGGGAGGAGAGCAGACAGCTATTCAACTGCCAGGGGACCGAGTTTCCATAGGTCACAGCACTCAATGGCTCTGGTATTCTGTGTATGCAAGGTTATCTTCTACCTCTAGCATATGA 1683 0.4248 MRGSSFFGQASRALNDSPAFSKLLILFTISSGGVVAYSESQSDNHGARTVESISPTDAKKKRVVVLGTGWAGTSFLKNLDVSSYDVQVVSPRNYFAFTPLLPNVTCGMVEARSIVEPIRNILNKNSGEIQFWEAECIKIDPVNKKVVCRSNDDHLVGKGDFQLGYDYLIVALGAQVNTFNTSGVMENCHFMKEIEDAQRIRRSVVDCFERSFLPSLSEEERRTNLHFVIVGGGPAGVAFAAELHDFIQEDLVKLYPMVQDLVKITLVHSGDHILNTFDERISSFAEQKFQRDGIEVKTGCRVVSVSDKLITMKEKSKGEIASMPYGMVVWSTGIKTRPVVRDFMGQIGQSKRLVLATDEWLRVEGCDNVYALGDCATIKQRKIMEDISKIFNAADKDKSGNLTVKEFQDVIDDILVRYPQVGLYLKNKHLRNVTDLLKESQWNDKKEISIEGFKSMLSHVDSQMKSLPSTAQVATQQGTYLASCFNRMEECKANPEGPLIFGESGRHQFRPFWYKHLGQFVPLGGEQTAIQLPGDRVSIGHSTQWLWYSVYARLSSTSSI* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00742 560 SUPERFAMILY EF-hand 375 468 IPR011992 -
Eupl06g00742 560 Gene3D - 49 411 - -
Eupl06g00742 560 Gene3D - 426 559 - -
Eupl06g00742 560 Pfam Pyridine nucleotide-disulphide oxidoreductase 61 384 IPR023753 GO:0016491
Eupl06g00742 560 ProSitePatterns EF-hand calcium-binding domain. 395 407 IPR018247 -
Eupl06g00742 560 ProSiteProfiles EF-hand calcium-binding domain profile. 382 417 IPR002048 GO:0005509
Eupl06g00742 560 SUPERFAMILY FAD/NAD(P)-binding domain 60 278 IPR036188 -
Eupl06g00742 560 PANTHER NADH DEHYDROGENASE 56 552 IPR045024 GO:0003954|GO:0006116
Eupl06g00742 560 SUPERFAMILY FAD/NAD(P)-binding domain 224 379 IPR036188 -
Eupl06g00742 560 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 51 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00742 Eupl-Chr6 12113515 12120371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00742 1 552 Chloroplast and Mitochondria Gene Families AT4G21490 62.791 0.0 709
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00742 K03885 - nnu:104605690 858.596