Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00741 ATGCGAGGCTCCTCCTTCTTCGGCCGAGCTTCGAGAGCTCTACCCGACTCCCCTGCCTTCTCTAAGCTGCTCCTTCTCTTCACTGTCAGTAGCGGAGGTCTCTTGGCATACTCGGAGTCACAATCAGACCATGGTGCACGTACTGTTGAATCGTCTCCAACTGATGCAAAGAAGAAGAGGGTGGTGGTGCTCGGAACTGGGTGGGCTGGCATTAGTTTCCTGAAAAATATTGACATTTCCTCATTTGATGTTCAGGTGGTATCACCCCGTAATTATTTTGCATTTACCCCGTTGTTACCAAGTGTCACTTGTGGTACGGTGGAAGCACGCAGCATCGTAGAGCCGATTCGGAATATTATAAAGAAGCAGAAAAGTGGAGATATTCAATTTTGGGAAGCAGAGTGCATCAAGATTGATGCAGTAAACAAGAAAGTTCTGTGTCGGACAAATGATGACCATTTGGTAGGGAAAGGAGAATTTCTATTGGACTATGACTATTTGGTTATAGCCTTAGGAGCCCAAGTAAATACTTTTAACACTTCTGGTGTTATGGAGCATTGCCATTTTTTGAAGGAAGTAGAGGATGCTCAGAGGATCCGTAGGAGTGTGGTAGATTGTTTTGAAAGGGCCGTCCTTCCAAGCCTAACTGAAGAAGAGAGGAGGACAAACCTTCATTTTGTAATCGTTGGTGGGGGTCCAACAGGTGTGGAATTTGCTGCAGAGCTGCATGACTTTGTCCACGAAGATTTAGTCAAGTTATATCCTATGGTTCAAGACCTAGTGAAAATAACGGTGGTCCAGTCGGGAGATCATATCTTGAACACGTTTGATGATAGAATTAGTTCATTTGCTGAAAAGAAGTTTCAAAGAGATGGTATTGAAATGAAAACAGGATGTCGAGTTGTTGGTGTCTCTGACAAGGTGATTACTATGAAGGTGAAATCAAAGGGAGAGATTGCTTCTATACCATATGGAATGGTTGTATGGTCTACCGGTACTGGGACACGTCCTGTTGTAAGCGACTTTATGGAACAAATTGGTCAGGGTAAAAGACGTGCTTTAGCAACTGATGAATGGCTGCGAGTCGAAGGATGTGATAACGTGTATGCCCTTGGTGATTGTGCTACTATTAATCAACGCAAAATCATGGCAGATATTTCAACGATTTTTAGTGCTGCTGATAAAGACAACTCCGGTACCTTAACTGTAAAAGAATTCCAAGATATAATTGATGACATCATAGTACGGTATCCGCAAGTGGACCTCTATTTACAGAGTAAGCATCTACGCAGTGTGACAGATCTGTTGAAGGAGTACCAAGGGAATGATAGGAAGGAAGTAGATATTAAAGCGTTCAAATCAGCACTTTGTCATGTGGATTCACAGATGAAGAGTCTTCCTGCAACTGCTCAGGTTGCCGCTCAACAAGGCGCATATCTTTCTAGGTGCTTTAACCGTATGGAGAAATGCAAAGCTAATCCAGAAGGTCCTCTTCGTTTTGGAGAATCCGGTCGTCATCAATTTCGCCCCTTCCAGTACAAGCATTTCGGTCAATTTGCTCCTTTGGGAGGAGAGCAGACGGCTGCCGAACTGCCAGGGGACTGGGTTTCCATGGGTCACAGCACCCAGTGGCTCTGGTACTCTGTGTATGCAAGCAAGCAAGTCAGCTGGCGGACAAGGGTGTTAGTGGTATCCGATTGGACAAGGAAATTCATTTTTGGGAGGGACTCGAGCCGTATCTGA 1743 0.4475 MRGSSFFGRASRALPDSPAFSKLLLLFTVSSGGLLAYSESQSDHGARTVESSPTDAKKKRVVVLGTGWAGISFLKNIDISSFDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNIIKKQKSGDIQFWEAECIKIDAVNKKVLCRTNDDHLVGKGEFLLDYDYLVIALGAQVNTFNTSGVMEHCHFLKEVEDAQRIRRSVVDCFERAVLPSLTEEERRTNLHFVIVGGGPTGVEFAAELHDFVHEDLVKLYPMVQDLVKITVVQSGDHILNTFDDRISSFAEKKFQRDGIEMKTGCRVVGVSDKVITMKVKSKGEIASIPYGMVVWSTGTGTRPVVSDFMEQIGQGKRRALATDEWLRVEGCDNVYALGDCATINQRKIMADISTIFSAADKDNSGTLTVKEFQDIIDDIIVRYPQVDLYLQSKHLRSVTDLLKEYQGNDRKEVDIKAFKSALCHVDSQMKSLPATAQVAAQQGAYLSRCFNRMEKCKANPEGPLRFGESGRHQFRPFQYKHFGQFAPLGGEQTAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVVSDWTRKFIFGRDSSRI* 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00741 580 PANTHER NADH DEHYDROGENASE 52 580 IPR045024 GO:0003954|GO:0006116
Eupl06g00741 580 SUPERFAMILY EF-hand 343 466 IPR011992 -
Eupl06g00741 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Eupl06g00741 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 225 243 - -
Eupl06g00741 580 PRINTS FAD-dependent pyridine nucleotide reductase signature 164 182 - -
Eupl06g00741 580 SUPERFAMILY FAD/NAD(P)-binding domain 58 278 IPR036188 -
Eupl06g00741 580 ProSiteProfiles EF-hand calcium-binding domain profile. 381 416 IPR002048 GO:0005509
Eupl06g00741 580 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 427 579 - -
Eupl06g00741 580 ProSitePatterns EF-hand calcium-binding domain. 394 406 IPR018247 -
Eupl06g00741 580 Gene3D - 426 579 - -
Eupl06g00741 580 Gene3D - 49 405 - -
Eupl06g00741 580 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 49 410 - -
Eupl06g00741 580 Pfam Pyridine nucleotide-disulphide oxidoreductase 59 382 IPR023753 GO:0016491
Eupl06g00741 580 SUPERFAMILY FAD/NAD(P)-binding domain 223 378 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00741 Eupl-Chr6 12080891 12103866 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00741 1 580 Chloroplast and Mitochondria Gene Families AT4G21490 66.667 0.0 800
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00741 K03885 - nnu:104605690 974.541