Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00740 ATGCGAATCTTCTCCTTCTACGAGAGAGCTTCTCGAGCTTTTCAAGACTATCCTTCGCTCTCCAAGCTTATTGTCGTCTTCACCGTCAGTAGTGGAGGTCTTGTGGCATATTCTGAATCAAAATCAAATCATGGAGCAAATGGTGCAGATTCATCTCATGTAGATAACAGGAAAAAGAGGGTGGTAGTGCTTGGAACTGGGTGGGCTGGCACAAGTTTTTTGAAAAATGTGGATAGTTCCTTGTATGATGTTCAGGTGGTTTCACCTCGTAATTATTTTGCATTTACCCCTTTGTTACCGAGTGTCACATGTGGCACAGTGGAAGCACGCAGCATTGTCGAGCCAATTCGCAACATTATTAAGAAGAAAAGTGGAGCAATAGGATATTGGGAAGCCGAATGTGTCAACATTGATGCGAAAAACAAGAAAGTTCACTGTCGGCCTAATCAAGGTGAGAACTTGGAAGGGGAAGAGGAATTTATTGTTGACTATGACTACTTGGTCATAGCCTTAGGTGCCCGCGCAAATACATTCAACACACCTGGTGTCGTGGAGCATTGTCATTTCTTGAAGGAAGTAGAGGATGCTCAAAATATCCGTAGGAGTGTGATTGACTGTTTCGAAAGGGCTTGCCTCCCCAACCTTACTGAGGAAGAAAGGAAGAGAAATCTTCATTTCGTAGTTGTTGGAGGTGGTCCAACAGGTGTGGAGTTTTCCGCGGAGCTTCATGACTTTATTCGTGAAGATTTAGTCAATCTGTATCCTACAGTGAAAGACCTAGTGAAAATAACTATCTTGGAGGCAGGAGATCATATTTTGAACATGTTTGACAAAAGAATCACTGCTTTTGCTGAACAAAAGTTCCAAAGAGATGGTATTGACCTGAAAACAGGGTCTATGGTTGTAAAAGTAACTGACAAGGCCATTTCTACAAAGGAAAGATTAAATGGAGAGGTTTCTTCTATACCGTATGGAATGGTTGTCTGGTCAACTGGTATTGGGACCCGCCCTGTCATAATGGATTTTATGCAGCAAATTGATCAGACTCACAGGCGTGTTTTAGCAACTGATGAATGGCTGCGAGTTGAGGGATGTGATGACACATATGCACTTGGCGATTGTGCCACTATTAATCAACGCAAAGTAATGGAAGATATCTCAGCAATATTTAATAAGGCAGACAAAGACAATTCTGGTACCCTAACGGTTAAAGAATTTCAAGATGTCATTGACGACATCTGTGAAAGGTACCCTCAAGTGGAGCTTTACTTGAAGAATAATCGGATGAAAAACATTGTAGATCTTTTGAAGGATTCCAAAGGGCATGATGACAAAGAATCCATTGAATTGGATATTGAAGGGTTCAAGGTTGCTCTTTCCCAAGTGGATTCACAGATGAAGAATCTTCCTGCAACAGCTCAGGTTGCTGCTCAACAAGGTACATACCTTGCGAGGTGTTTTAATCGTATGGAGGAGTGTGAAAAGAATCCAGAAGGTCCTCTCAGGTTCAGGGGAACAGGACATCATCGATTTCGTCCATTTAGGTATAAGCATTTTGGGCAGTTTGCTCCACTAGGGGGAGAGCAAACAGCAGCACAATTGCCCGGTGATTGGGTTTCAATTGGTCGCAGCAGTCAGTGGCTCTGGTATTCTGTTTATGCAAGCAAGCTAGTCAGCTGGCGCACAAGGGTATTGGTGATAACTGACTGGACAAGGCGATTTGTATTTGGGAGGGATTCAAGTCGCATTTGA 1752 0.4287 MRIFSFYERASRAFQDYPSLSKLIVVFTVSSGGLVAYSESKSNHGANGADSSHVDNRKKRVVVLGTGWAGTSFLKNVDSSLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPIRNIIKKKSGAIGYWEAECVNIDAKNKKVHCRPNQGENLEGEEEFIVDYDYLVIALGARANTFNTPGVVEHCHFLKEVEDAQNIRRSVIDCFERACLPNLTEEERKRNLHFVVVGGGPTGVEFSAELHDFIREDLVNLYPTVKDLVKITILEAGDHILNMFDKRITAFAEQKFQRDGIDLKTGSMVVKVTDKAISTKERLNGEVSSIPYGMVVWSTGIGTRPVIMDFMQQIDQTHRRVLATDEWLRVEGCDDTYALGDCATINQRKVMEDISAIFNKADKDNSGTLTVKEFQDVIDDICERYPQVELYLKNNRMKNIVDLLKDSKGHDDKESIELDIEGFKVALSQVDSQMKNLPATAQVAAQQGTYLARCFNRMEECEKNPEGPLRFRGTGHHRFRPFRYKHFGQFAPLGGEQTAAQLPGDWVSIGRSSQWLWYSVYASKLVSWRTRVLVITDWTRRFVFGRDSSRI* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00740 583 SUPERFAMILY EF-hand 337 469 IPR011992 -
Eupl06g00740 583 PRINTS FAD-dependent pyridine nucleotide reductase signature 225 243 - -
Eupl06g00740 583 PRINTS FAD-dependent pyridine nucleotide reductase signature 164 182 - -
Eupl06g00740 583 PRINTS FAD-dependent pyridine nucleotide reductase signature 61 80 - -
Eupl06g00740 583 Gene3D - 425 582 - -
Eupl06g00740 583 Gene3D - 50 412 - -
Eupl06g00740 583 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 427 582 - -
Eupl06g00740 583 Pfam Pyridine nucleotide-disulphide oxidoreductase 59 384 IPR023753 GO:0016491
Eupl06g00740 583 ProSiteProfiles EF-hand calcium-binding domain profile. 381 416 IPR002048 GO:0005509
Eupl06g00740 583 PANTHER NADH DEHYDROGENASE 52 583 IPR045024 GO:0003954|GO:0006116
Eupl06g00740 583 SUPERFAMILY FAD/NAD(P)-binding domain 219 378 IPR036188 -
Eupl06g00740 583 SUPERFAMILY FAD/NAD(P)-binding domain 58 277 IPR036188 -
Eupl06g00740 583 SMART efh_1 385 413 IPR002048 GO:0005509
Eupl06g00740 583 ProSitePatterns EF-hand calcium-binding domain. 394 406 IPR018247 -
Eupl06g00740 583 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 49 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00740 Eupl-Chr6 12061333 12079667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00740 1 583 Chloroplast and Mitochondria Gene Families AT4G21490 72.089 0.0 864
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00740 K03885 - vvi:100241384 1004.97