Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00739 ATGGCAAGTGATCAGGAAGAAATCACACATGTTTCACACATGCATGTCCTCGATGACAATATTGATGATGACGAAGACGATAACGATAATGATATTGATGATGAAGAGGATGAAGAGGAGAGCTCGAATGGGTGTACGAACATGTATGGAAACTGTGGGTCTCGCAGGGGATCAGGTTGGTTTCTAGGAAAGGTGTTGGATCCTAGAGCAAAGTGGATTCAAGATTGGAACCGGGTGTTCCTCCTAGTCTGTGCGACAGGTCTCTTCGTCGATCCTCTCTTTTTCTATGCCCTCTCTATTAATGAAAGATGGTTGTGCCTCTTTGTCGACGGGTGGTTCGCCATGACTGTGACTGCGCTCCGGTGTATGACCGATGCCTTGCATGTGTGGAACATGTGGTTGCAGCTCAAGATGGTGAAGCGCTCTCATCATGCAGTTGGGGAAGAAGATAAGGAAGGCAAGCTCCACAAGGCTAGTGCTCGCATGGTGGCGCTCAGATACTTAAAAGCCAAGAAGGGTTTCTTCTTTGATCTCTTCGTCATCCTGCCTGTGCCCCAGGTAATGCTGTGGGTGGCAATTCCGTCACTGTTGGATAGAGGATTAACGACAGAGGTGATGACGATATTCCTGATAATGTTCCTGTTCCAGTATCTCCCAAAGATTTATCACTCCGTCTGCCTCTTACGTCGCATGCAAAACTTCTCTGGATACATTTTTGGCACTGTTTGGTGGGGGATCGCACTCAACATGATTGCCTACTTTGTTGCAGCCCATGCCGCGGGTGCTTGTTGGTACTTGCTAGGAATCCAAAGGGCTGCAAAGTGTCTGAGAGAGCAATGCAGAACCACACATGGGTGTGGACTAAGGACATTAACATGTAAAGAACCTATCTACTATGGGACAACCATGGCCGAGGATGCAGTCAGATTTGCTTGGGCAGAGAACAAACATGTCAGGGCAATGTGTATAGAAAGTGCTGATAATTTTAATTATGGAGCTTACAAATGGACGGTTCCTCTGGTTACAAACGAGAGCCGTTTCGAGAAGATACTCTTTCCCATCTTTTGGGGCCTAATGACGCTAAGCACGTTTGGGAACCTCGAGAGCACAACGGAGTGGCTGGAAGTTGTTTTCAATATCATCATTTTAACCAGCGGGCTCCTCTTGGTGACCATGTTGATTGGAAATATCAAGGTTTTCTTGCATGCAACTACGTCGAAGAAACAAGCAATGCAATTGAAGATGAGGAACATCGAGTGGTGGATGAGGAGGAGACACATGCCACAGAATTTCAGGCAGAGAGTACGACAATATGAACGACAACGATGGGCAGCGATGCGAGGGGTGGACGAATGCGAGATGATACGGAACCTTCCCGAGGGCCTGAGAAGGGACATCAAGTACCATCTCTGTCTTGACCTAGTGCGACAGGTACCCTTGTTTCAACACATGGATGACTTGGTCCTAGAGAACATTTGTGACCGTGTGAAGTCCCTCATATTCCCCAAAGGAGAAACGATAGCCATAGAGGGTGACCCAGTTCAGAGAATGTTGTTTGTTGTAAGGGGCCATCTACAGAGTAGCCAAGTTCTACGAGACGGCGTAAAGAGTTGCTGCATGTTAGGTCCTGGGAACTTCAGTGGAGATGAGCTCCTATCCTGGTGCCTTAGACGACCGTTTGTCGAGCGTTTACCACCATCATCGTCGACTTTAGTGACACTTGAAACCACAGAGGCGTTCGGGCTAGAAGCCGAAGATGTTAAGTATGTGACGCAACATTTCCGTTACACGTTTGTTAACGAGAGAGTGAAGAGAAGTGCAAGGTACTACTCACCTGGGTGGAGAACTTGGGCAGCTGTGGCGATTCAATTAGCTTGGAGGAGGTACAAACACCGTTTAACGCTCACGTCGCTGTCATTTATACGGCCACGAAGACCGCTGTCGCGATGTTCTTCACTGGGGGAAGACAGACTCCGGCTCTATACCGCTCTATTAACCTCACCGAAGCCCAATCAAGATGATTTTTGCTTCTGA 2034 0.4789 MASDQEEITHVSHMHVLDDNIDDDEDDNDNDIDDEEDEEESSNGCTNMYGNCGSRRGSGWFLGKVLDPRAKWIQDWNRVFLLVCATGLFVDPLFFYALSINERWLCLFVDGWFAMTVTALRCMTDALHVWNMWLQLKMVKRSHHAVGEEDKEGKLHKASARMVALRYLKAKKGFFFDLFVILPVPQVMLWVAIPSLLDRGLTTEVMTIFLIMFLFQYLPKIYHSVCLLRRMQNFSGYIFGTVWWGIALNMIAYFVAAHAAGACWYLLGIQRAAKCLREQCRTTHGCGLRTLTCKEPIYYGTTMAEDAVRFAWAENKHVRAMCIESADNFNYGAYKWTVPLVTNESRFEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIILTSGLLLVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRRRHMPQNFRQRVRQYERQRWAAMRGVDECEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDDLVLENICDRVKSLIFPKGETIAIEGDPVQRMLFVVRGHLQSSQVLRDGVKSCCMLGPGNFSGDELLSWCLRRPFVERLPPSSSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVNERVKRSARYYSPGWRTWAAVAIQLAWRRYKHRLTLTSLSFIRPRRPLSRCSSLGEDRLRLYTALLTSPKPNQDDFCF* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00739 677 FunFam Cyclic nucleotide-gated ion channel 1 407 471 - -
Eupl06g00739 677 Gene3D Jelly Rolls 478 596 IPR014710 -
Eupl06g00739 677 MobiDBLite consensus disorder prediction 20 42 - -
Eupl06g00739 677 MobiDBLite consensus disorder prediction 1 49 - -
Eupl06g00739 677 Gene3D Helix hairpin bin 405 471 - -
Eupl06g00739 677 SUPERFAMILY cAMP-binding domain-like 406 594 IPR018490 -
Eupl06g00739 677 ProSiteProfiles cAMP/cGMP binding motif profile. 480 590 IPR000595 -
Eupl06g00739 677 Pfam Ion transport protein 76 397 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Eupl06g00739 677 CDD CAP_ED 480 586 IPR000595 -
Eupl06g00739 677 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 61 637 - -
Eupl06g00739 677 SUPERFAMILY Voltage-gated potassium channels 71 401 - -
Eupl06g00739 677 FunFam cyclic nucleotide-gated ion channel 4 478 596 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00739 Eupl-Chr6 12040735 12050519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00739 51 675 Ion Channels AT5G54250 77.638 0.0 1016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00739 K05391 - nnu:104605692 1147.88