Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00721 ATGGAAGAAGAAGGCGAAGCAGTACCGGACCATCTCCGTTGTAGCAGAAGCGACGGCCGGCAATGGAGGTGTGTTAGACGAGTCATGGAGAGCAAGAAGTTTTGCGAAGTTCACTATCTCCAAGCACGCCATCGCCAGTACAAACAAAAGGTTCCAGACTCCATAAAGCTCCAAAGAAAACCCGGACGCAAAAGAACTGGAAACAAAGATTCCACGGTGCCTCCGTATCAAGAGCATCTCCGGGTGAAAGCTTCGGAGAAGTTAGCGAAGCTTTTGAAGCAGAAAAGAAGGCGGTCGCTTGGATTTCCGGAGGCTAAGTTGGATAAGGCTTTAAAGAATATGAAGTTGAAAAAAAGGGGGAATTTGCAGTTGGAATTGCTAAGAGTGTTCTTGCAGAGGCAAATGGAGAGGAAGAAGAAGCAGAGTTGGAGTTTGGAGAAGAGTAGTAGTGAGGGGGAGTTGATGAGGGACTTGCCGAATGGCCTCATGGCTATTTCCCCTGTTCCGGTGCAGGGTTTCGGCAATGCTGGTTTGTTCTTTGAAAAAAAATTAGGGCTTGATTCAGGTTCTTTTATGAGACGATGCATTCGGTCCAAGAACATTGAGCCATTCCCGATTGGTTCTTTTCAGATTGTTCCTTATGGGCGAAATGTAGTGGATTCGAGGAAAGGTGGAAAGAGGATTTGCCATCGATGCCGTAGAAGTAATTGTGTGAGTGTCATTCGGTGTTCGAGTTGCCGGAAAGAATCCTTTTGCATGAGCTGCATTGCAGAATGGTACTCCGATATGCCAGAAGAAGTGAAGATGTCCTGTCCAGTTTGTCGTGGCACTTGCAACTGTAAGACGTGCTTGAGTAATCAATCAAAAGATGGTGAATGTAAGGATTTTATGAGATGTCAAAATAAGGTTAACAAAATCCTACATTTCCATTATTTGGTCTGTCTGCTTCTTCCAGTACTTAAACAAATCAACCAGGAACAGAGGAGTGAGCTGGAAATAGAGGCAAAAGTAAAAGGAAAAGCACCATCAGATATTTGGATTCAGCAGGTAGAATGTGGCTTTGATGAGCAACTTTTCTGTAATAATTGCAAAACTTCCATTGTGAATTTCCATAGAAGCTGCTCAAACTGTTCTTATGACCTTTGCCTAAGTTGTTGTCGGGAGATCCGTCATGGGAGCCTACCTGGAGGCACTGGAGCAGTAATGTTTCAATACCCTAATAAAGGGAAAGCTTACATGCATGGTGGCAAGCCTCTTCTGGATATGAAGATAAAGCAGATAAGTTCCTTCCAACGAAGATATGGGAATACATTGTTGGCTCGTTCCATGGCCTTACCTGATTGGACAGCTAATATTGGTGATGGCAGTATTTCTTGCCCACCTAAAGAGCTTGGTGGTTGTGGTGATAACATATTGGATTTGCGATGTGTTTTCCCATTTAATTGGACCGAAGAACTGGAAATAAGTGCTGAAGAAATAGCTTGCTGTTATGACTTTCCAGAAACTTTAGATGCTACATCTCACTGTTCCTTATGTATTGGCACGCATGATAAGGCTGGGGGATTTAGCAGCAAGTTGCAAGAAGCAGCTAACAGAGAAGATTCTGATGATAACTTCTTATATTGTCCAACTGTACGGGACATTCAGGATGACCTTGAACACTTTCAGAAGCACTGGAGTAAAGGTCAACCTGTAATAGTTCGTAATGTGCTTCAGAATAAATCGGATTTGAGCTGGGATCCACTGGTCATGTTCCACACATATCTTGAAAGGAACATTAACAAATCTGAGAATGATGCAAAGGCAGTGAAAGCTACTGATTGCTTGGATTGGTGTGAGGTAGAAATTGGAATTCAGCAATTTTTTAAGGGATATTTGGAGGGGAGGACACATTCGAACCTGTGGCCTGAGATGCTGAAATTGAAGGATTGGCCTTCTCCCAAATTGTTTCTAGAACAGTTTCCTGCTCATAATGCTGAATTCATTCGTGCACTACCATTTCAAGAATATACAAATCCCAACTCTGGTCTTCTAAACCTTGCTGCCAAGCTGCCAAAGGAATTCTCAAAGCCTGACCTAGGTCCAAGAGTATATATTTCATATGGGATAGCTGAGGAGCTTGGACGGGGTGATTCTGTAACTAAGCTATATTGTGATTCAACTGATGTGGTGAATGTTCTGGCACATACTACAGAGGTTGCAATTCCCCCGGAACAACTTGAAAAGATCAGAAAGCTAAAGAAAAAGCACAAGACACAAGATGAAAGGGAGTCTTTCAGGACTTCTATGTATCAGAAAATGGTAAATGAAGTGAAACTAGAGTCATCTTTGGCTAGTGAGAACATGGAAGCAGGCACTAGGGAGACACTGGATGTCACTGGAAGAGGAACTCATTTATCCAATGGAGCTGCTGAAGTTTCTTGTTTCTCTGCTGTCATGCGAATACCTGAAGAATGCGATATTGGTGTGAAAGATGAAAAAATGTTGGATACTGGAGAACATGACTCCGAATCTGAAGTTCGAAGGGATTGCTGTAGAAGTACTCAGAGCTCTGAAAAATCTGATGGAGACAAGTCCTGTCAGGAGGACAATAGAGAAAGCCCTTCTGGTTTTGGAAAAAAGTCATTGGCTAATTCCTGTGGAGCCCAATGGGATGTTTTTCGTAGAGAAGATGTTCCAAAGCTGGAAGAATACCTCAGAAAACACTCCACTAAGTTCAGGCACACATATTGCTCTCCAGTTGAACATGTTGCTCATCCAATTCTTGATCAGTGTTTCTTTCTTGACTCAACTCACAAAAGGAGGCTTAAGGAGGAGTTCAAAGTCGAACCTTGGACTTTTGATCAGCACCTTGGAGAAGCTGTCATCATTCCTGCTGGATGTCCATATCAAATTAGAAATCTTAAGTCTTGTATAAATGTGGCATTGGACTTCGTATCACCTGAAAATGTAAGCGAGTGCATCCAGTTGATCGATGAACTCCGTCTGCTTCCTAAAAACCATAAAGCCAAACAAGACAGGCTAGAGGTGAAGAAAATGAGCCTGTACAGTATTAGTGCAGCAATTAAAGAAATTCGTGAGTTGACATCGAGTGCAGTGATTGGTTCTGAACTCAAAGAGAAGTTGTGA 3129 0.4267 MEEEGEAVPDHLRCSRSDGRQWRCVRRVMESKKFCEVHYLQARHRQYKQKVPDSIKLQRKPGRKRTGNKDSTVPPYQEHLRVKASEKLAKLLKQKRRRSLGFPEAKLDKALKNMKLKKRGNLQLELLRVFLQRQMERKKKQSWSLEKSSSEGELMRDLPNGLMAISPVPVQGFGNAGLFFEKKLGLDSGSFMRRCIRSKNIEPFPIGSFQIVPYGRNVVDSRKGGKRICHRCRRSNCVSVIRCSSCRKESFCMSCIAEWYSDMPEEVKMSCPVCRGTCNCKTCLSNQSKDGECKDFMRCQNKVNKILHFHYLVCLLLPVLKQINQEQRSELEIEAKVKGKAPSDIWIQQVECGFDEQLFCNNCKTSIVNFHRSCSNCSYDLCLSCCREIRHGSLPGGTGAVMFQYPNKGKAYMHGGKPLLDMKIKQISSFQRRYGNTLLARSMALPDWTANIGDGSISCPPKELGGCGDNILDLRCVFPFNWTEELEISAEEIACCYDFPETLDATSHCSLCIGTHDKAGGFSSKLQEAANREDSDDNFLYCPTVRDIQDDLEHFQKHWSKGQPVIVRNVLQNKSDLSWDPLVMFHTYLERNINKSENDAKAVKATDCLDWCEVEIGIQQFFKGYLEGRTHSNLWPEMLKLKDWPSPKLFLEQFPAHNAEFIRALPFQEYTNPNSGLLNLAAKLPKEFSKPDLGPRVYISYGIAEELGRGDSVTKLYCDSTDVVNVLAHTTEVAIPPEQLEKIRKLKKKHKTQDERESFRTSMYQKMVNEVKLESSLASENMEAGTRETLDVTGRGTHLSNGAAEVSCFSAVMRIPEECDIGVKDEKMLDTGEHDSESEVRRDCCRSTQSSEKSDGDKSCQEDNRESPSGFGKKSLANSCGAQWDVFRREDVPKLEEYLRKHSTKFRHTYCSPVEHVAHPILDQCFFLDSTHKRRLKEEFKVEPWTFDQHLGEAVIIPAGCPYQIRNLKSCINVALDFVSPENVSECIQLIDELRLLPKNHKAKQDRLEVKKMSLYSISAAIKEIRELTSSAVIGSELKEKL* 1043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00721 1042 Coils Coil 121 141 - -
Eupl06g00721 1042 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 9 1031 IPR045109 GO:0032454|GO:0033169
Eupl06g00721 1042 MobiDBLite consensus disorder prediction 53 67 - -
Eupl06g00721 1042 ProSiteProfiles WRC domain profile. 8 54 IPR014977 -
Eupl06g00721 1042 ProSiteProfiles Zinc finger RING-type profile. 229 275 IPR001841 -
Eupl06g00721 1042 Gene3D Cupin 536 788 - -
Eupl06g00721 1042 Gene3D Cupin 824 1004 - -
Eupl06g00721 1042 SMART cupin_9 654 995 IPR003347 -
Eupl06g00721 1042 Pfam WRC 9 50 IPR014977 -
Eupl06g00721 1042 Pfam JmjC domain, hydroxylase 878 978 IPR003347 -
Eupl06g00721 1042 SUPERFAMILY Clavaminate synthase-like 551 1012 - -
Eupl06g00721 1042 MobiDBLite consensus disorder prediction 831 877 - -
Eupl06g00721 1042 ProSiteProfiles JmjC domain profile. 673 995 IPR003347 -
Eupl06g00721 1042 MobiDBLite consensus disorder prediction 53 78 - -
Eupl06g00721 1042 MobiDBLite consensus disorder prediction 831 869 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00721 Eupl-Chr6 11604280 11629165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00721 5 48 GRF Transcription Factor Family AT2G22840 43.182 3.98e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Eupl06g00721 JmjC 1.9e-12 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00721 K15601 - nnu:104612247 1419.06