Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00720 ATGACGTCCCAGCACCCATCCGAACTCGATTCCGGCACTGCGGACTCGATGACGTCTTCCCCACGATCGGACCACCCTCCGCCGCACAGATTGCAAGACGATTATCAGCCACGTATCCGATTCATGTGTAGTTTCGGCGGTCGAATCCTCCCTAGGCCCCACGATAACCAACTCCGGTACGTTGGAGGCGATACGCGCATCGTAGCGGTTCACCGCTCTTCCACCTTCTCCGCCCTCCTTACCAAGCTCTCAAAGCTCTCTGGTACGACCGACTTCACCGTCAAATACCAGCTCCCTAATGAAGATCTGGACGCTTTGATTTCTGTCACCACCGATGAAGATGTCGAGAACATGATGGAAGAGTATGATCGCTTAACACAGGGCCTCAACCCCAAAGCGGCTCGGCTTAGGCTCTTCCTCTTCCCCATCGGCAGCTCCCGCGCCAGCAGTATTGACTCTCTCCTTGACGGTTCAACCAAGCGGGACCACTGGTTCTTCGACGCACTCAATGGCGGTGGCGGATCGGCTTCTATTAGAGCTACCCTCGAACGTGGCCAGTCCGAAGCCTCCTCGATCGTCTCCGAAGTCCCTGACTATCTCTTCGGCCTCGATAACTCGGACGAGACTCGCGAACCAAAACCAAAAAACCGGTCGATTTTGGCCGAAAATGTGTCGGTCTCTAATCCCGGTTCGCCGGCTCATGCCACTTCGTTTCCGTACTACTCGACCTCATCGGCGCCTTGTGTGCCGTCTCTTCCCGATCTACGGCCCGTTAGAACCAAGCCAGAAAATCCAAACCCAGCTGTTGATTCGAAGGATAACCAGATCGAGGGTTCCGCGGAGGCAGGAGAGCCGCCAATTCCGCATCAGACCGGTTACCCCGGTAATCCAATGTGGCAGTACTTGCCGGAATCTCACTTTCCGGGTCCCACGGTACGCCAAGTGCCGGTTTACTACATGCCAGGTCCGGTCCCAGGTAGTAACGTTCAGGTTCAACACATTCCCATGCCAGCACCGTACGTTCAGCGATTTACGGCGCCGGCGGCTCATATTCCGGTAGGTTACCGGCATCCGGTTCCCCATGCGGGTCAGTTATACGGAGCGGGGATGAAACCAGTTACGGCGGTGGAAGCTTACGAGTTCCCGGCTGGAATGATGTCAGATGCAGGGAATCAGCAAGTGTACTACGGTGCGAGAAATACCGGGGTGCTTCAGGGCTACTCTGCTGCGGTAGTCCAGGTAGGGCCCGACTTGCAGGGTACCGGAACGGAGATGAAGATCGCCAATGGTTCTCAGTCGCTTTGA 1305 0.5625 MTSQHPSELDSGTADSMTSSPRSDHPPPHRLQDDYQPRIRFMCSFGGRILPRPHDNQLRYVGGDTRIVAVHRSSTFSALLTKLSKLSGTTDFTVKYQLPNEDLDALISVTTDEDVENMMEEYDRLTQGLNPKAARLRLFLFPIGSSRASSIDSLLDGSTKRDHWFFDALNGGGGSASIRATLERGQSEASSIVSEVPDYLFGLDNSDETREPKPKNRSILAENVSVSNPGSPAHATSFPYYSTSSAPCVPSLPDLRPVRTKPENPNPAVDSKDNQIEGSAEAGEPPIPHQTGYPGNPMWQYLPESHFPGPTVRQVPVYYMPGPVPGSNVQVQHIPMPAPYVQRFTAPAAHIPVGYRHPVPHAGQLYGAGMKPVTAVEAYEFPAGMMSDAGNQQVYYGARNTGVLQGYSAAVVQVGPDLQGTGTEMKIANGSQSL* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00720 434 CDD PB1_UP2 42 141 - -
Eupl06g00720 434 PANTHER OS05G0427100 PROTEIN-RELATED 14 345 - -
Eupl06g00720 434 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 58 143 - -
Eupl06g00720 434 Gene3D - 59 142 - -
Eupl06g00720 434 MobiDBLite consensus disorder prediction 1 36 - -
Eupl06g00720 434 SMART PB1_new 53 143 IPR000270 GO:0005515
Eupl06g00720 434 MobiDBLite consensus disorder prediction 251 295 - -
Eupl06g00720 434 ProSiteProfiles PB1 domain profile. 38 143 IPR000270 GO:0005515
Eupl06g00720 434 Pfam PB1 domain 54 142 IPR000270 GO:0005515
Eupl06g00720 434 MobiDBLite consensus disorder prediction 1 25 - -
Eupl06g00720 434 SUPERFAMILY CAD & PB1 domains 54 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00720 Eupl-Chr6 11580687 11584779 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00720 38 170 MAP Kinase Kinase Kinase AT5G57610 47.368 4.01e-30 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00720 - - nnu:104612242 553.903