Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00700 ATGAAGGAATGCGAACTCTGCAATTCTCCGGCGAGGATGTATTGCGAATCGGATCAAGCGAGCTTGTGTTGGGACTGCGATGCGAAGGTCCATTGTGCGAATTTCCTCGTCGCGAGACATTCGAGGTGTCTCCTTTGCCACGTCTGTCAATCTCCCACGCCATGGAAAGCTTCAGGAGAGAAGCTCGGAAATACGGTTTCGGTATGCGAAAAGTGTGTTGATAGCTGTAACCGAAGGCCGGAGAGAGGCGGAGAGGAAGAAAAGAGCGAAGGAAGAAATGATGATGAAGACGATGAAGAGATTGACGATGAAGATGAAAGCGAGGATGATGATGAGGATGATGATGACGACGATAACGACGATAACGACGAAGACGACGACGGTGATGATGAAGAAGAAGACGGCGATAATCAAGTTGTTCCGTGGTCTTCTACGCCACCTCCGCCTGTTGCGAGTTCTTCGAGTAGCGAAGAGTCGTCTTCGAGCAGATTCTGTAATGGTCGAGGTGTCTCTCAAATAGAGATGAAGTTTTCGTTGAAACGGATGCGTGAGAATGCAGATCTCGGTTCTCAGGATGATTTCGGCTGCTCGTCTTCCCAACCGAACTACGACGCGTCAGCCGACGACGAAGCCACATCTTTCGGCTCGTTCAAGCCTTGTAAGGACTGGAAAAGAGCCCTAACGATCCGATCCGTTCAAGAGGACTCGAAATCGACGGCTCTCATGGATTCTCTCAAGAGATTGCAGCAAAACGTGCTCTCCGGGAGCGATACATCCGCAGCGGTGCTCGATATCTGCAAACTAAGCAAAGATCCCAGAGCTGTTGATCTTGTTTCCCCCGACTCGTCTATCCCTCCGATCTGA 864 0.5046 MKECELCNSPARMYCESDQASLCWDCDAKVHCANFLVARHSRCLLCHVCQSPTPWKASGEKLGNTVSVCEKCVDSCNRRPERGGEEEKSEGRNDDEDDEEIDDEDESEDDDEDDDDDDNDDNDEDDDGDDEEEDGDNQVVPWSSTPPPPVASSSSSEESSSSRFCNGRGVSQIEMKFSLKRMRENADLGSQDDFGCSSSQPNYDASADDEATSFGSFKPCKDWKRALTIRSVQEDSKSTALMDSLKRLQQNVLSGSDTSAAVLDICKLSKDPRAVDLVSPDSSIPPI* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00700 287 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Eupl06g00700 287 SMART bboxneu5 1 45 IPR000315 GO:0008270
Eupl06g00700 287 MobiDBLite consensus disorder prediction 149 167 - -
Eupl06g00700 287 CDD Bbox1_BBX-like 4 45 - -
Eupl06g00700 287 MobiDBLite consensus disorder prediction 191 209 - -
Eupl06g00700 287 MobiDBLite consensus disorder prediction 76 167 - -
Eupl06g00700 287 MobiDBLite consensus disorder prediction 188 215 - -
Eupl06g00700 287 MobiDBLite consensus disorder prediction 90 137 - -
Eupl06g00700 287 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
Eupl06g00700 287 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00700 Eupl-Chr6 11251293 11252767 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00700 2 203 C2C2-CO-like Transcription Factor Family AT4G27310 47.706 6.39e-40 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl06g00700 zf-B_box 1.8e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00700 - - ming:122059325 250.751