Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00688 ATGAGTAGAATACTAGAATATCTCTTGATCATCTCTGAAACACTCATGTTTGTCGAGATGATTAGTAACTGCAGAAACCCAACTATTTTTCTTTCTTCTCTGTTCCTCATTTCCTACTCTCTATCTCTATGTTCTCATGCAGCCAACCTAATTACACAAGGCCAATCCATCACAGATGGCCAAACCATAATCTCAACCGGAGAAAATTTCGCTTTGGGGTTCTTCAGCCCTGAAAATTCAACAAATCGCTATGTCGGAATATGGTATTATAAGATCTCGGTACAAACAGTTGTATGGGTGGCAAACAGAGACGACCCAGTTTTGGATTCCTCCGGAGTTTTCACTTTCGGAAACAACGGGAATCTGATGGTCTTAGATGGGAACGGAACATCTCTCTGGTCGACGAACGCTTCACTTGTCTCGACTAATTCTTCTGCAATTCTTATGGATACTGGAAATCTCATTCTAACAAGTAGCGGAGAGACTGATTCTGATAAGGCCTTCTGGCAGAGCTTCGAGCAACCGACAGATACATACTTACCCGGCATGGAAGCTGGCTTGAATCTCTTAACCGGTGAGAACCATATCTTCACTTCGTGGAAAACTGCTAGTGATCCTTCGATGGGGAATTTCTCTATGAGCGTTGATCCTCAGGGGGCAGCACAGATTGTGATATGGGAGCAGTCGGAAAGGCGTTGGAGAAGTGGGCTATGGGATGGACAGACGTTTTTGGGTGTCCCTGCTATGAGACCTCTCTATCTCTACGGTTTTAAGCTTACCAATGACGACCAAGAAGGAAAAAGGTACTTCACTTATACCATGTTTAACAGCTCTGATATCTTGAGGTTTCGAGTAAGATGGGACGGAGGCGAGGAGCAGCTGCTCTGGGATGAAGGAGGGAAGGTCTGGAACCAAATTTGGTTGCAACCCATTAATGAATGCGAGCTTTACAACACGTGTGGGAGTTTTGGGAGCTGTAGTATGTTGGATACTCCTATTTGTAGTTGTCTTCAAGGGTTTGAACCCAAATCGATAGATGAATGGAGTAGGGGAAATTGGTCAGGTGGGTGTGTGAGGAGAACACAATTACAGTGTGGGAGAAATAGTAGTAGTATTGAGGAGGTGAATGGGGATGCGTTTTTGAAGTTGGAAGGGATGAAATTGCCAGATTTTGCTGATTGGGTGGCAGTTGATGACAGGCAAGAGTGTGTAGACAAGTGTTTGATGAATTGTTCATGTAAGGCCTATGCGTACCAAAGTGGGATCGGATGTTTGATGTGGGATCAGGATTTGGTTGATGTTCAGCATTTTTCATCTGGTGGGGATGAACTCTACATCCGTCTGGCTGATTCTGAACTAGGTGGGAAAAGCAAGATATCAAAAATCATAATTATAATAATTGTAATACTGGGGACAATATTCTTAAGCACATCTGCCTTCTTATTGTGGAGGTACAAAGCAAAACTGAAAGATTTGTGTGGAAAGGGAAAGAAAGAACCAACAATATATGATATAAGCAAGAGTAGAGAATTTTGGACAGATTTCTCAGGACAAGATGATATTGGAGGAGAAGGGAACAAAGGAAATGTGCCTGAATTACCATTGTTTAGTTTCAACTGTATAGCAACTGCTACAAACGACTTTTCTAATACAAATAAGCTTGGACAAGGGGGTTTTGGTCCTGTTTACATGGGTAAGCTACCTTGTGGAAAGGAAATAGCTGTTAAGAGACTTTCAAGGAGGTCTGGACAAGGCTTAGAAGAGTTCAAAACTGAGATTATACTAATTGCCAAACTACAACACAGAAATCTAGTGAGGATTTTGGGCTGTTGCATTGAAGGGGAAGAAAAAATGGTGGTCTATGAATACATGCCTAACAAAAGCTTGGACGCTTTTATTTTTGATTCAGAAAAGCAAGCACAATTGGACTGGGGGAAACGCTTCAACATCATTGAAGGAATTGCACGAGGGCTCCTTTATCTGCACCGAGATTCAAGATTAAGAATAATTCATCGAGATCTAAAAGCTAGCAACATTTTATTGGATGAAGAGATGAACCCCAAAATATCAGACTTTGGCATGGCTAAGATCTTTGGAGGGAATCAAAATCAAGCAAATACAAACAGAGTAGTTGGGACATATGGCTACATGTCTCCCGAGTATGCAATGGAAGGGCTATTTTCTGTCAAATCCGATGTTTATAGCTTTGGAGTACTACTCCTAGAGATAGTGAGCGGCAAGAAGAACAAGCACTTTCGTTATTCTGAGCTCTCCTCCAACCTTCTTGGATATGCATGGCAGCTCTGGAATGAACAGAAAGCAATGGAGTTCATAGATCCATCCTTAGGAAATTCATGCTCTCCATGTCAAGTGTTGAGATGCATGCATGTGGGGCTGTTGTGCGTCCAGGACTCTGCAATGGATAGACCTACGATGTCATCAGTTGTTTTAATGTTGGGAAGTGAAACTACAATTCTTCCTACACCTATACAGCCCATCTTTACAATTGGGAGAAATCCCATAGAGATCGATTTATCTACAGAGAGTGCTGAAATTATATCCAGAAATGATGTAACAGTTACCATGATCGTTGGAAGATAG 2601 0.4195 MSRILEYLLIISETLMFVEMISNCRNPTIFLSSLFLISYSLSLCSHAANLITQGQSITDGQTIISTGENFALGFFSPENSTNRYVGIWYYKISVQTVVWVANRDDPVLDSSGVFTFGNNGNLMVLDGNGTSLWSTNASLVSTNSSAILMDTGNLILTSSGETDSDKAFWQSFEQPTDTYLPGMEAGLNLLTGENHIFTSWKTASDPSMGNFSMSVDPQGAAQIVIWEQSERRWRSGLWDGQTFLGVPAMRPLYLYGFKLTNDDQEGKRYFTYTMFNSSDILRFRVRWDGGEEQLLWDEGGKVWNQIWLQPINECELYNTCGSFGSCSMLDTPICSCLQGFEPKSIDEWSRGNWSGGCVRRTQLQCGRNSSSIEEVNGDAFLKLEGMKLPDFADWVAVDDRQECVDKCLMNCSCKAYAYQSGIGCLMWDQDLVDVQHFSSGGDELYIRLADSELGGKSKISKIIIIIIVILGTIFLSTSAFLLWRYKAKLKDLCGKGKKEPTIYDISKSREFWTDFSGQDDIGGEGNKGNVPELPLFSFNCIATATNDFSNTNKLGQGGFGPVYMGKLPCGKEIAVKRLSRRSGQGLEEFKTEIILIAKLQHRNLVRILGCCIEGEEKMVVYEYMPNKSLDAFIFDSEKQAQLDWGKRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEEMNPKISDFGMAKIFGGNQNQANTNRVVGTYGYMSPEYAMEGLFSVKSDVYSFGVLLLEIVSGKKNKHFRYSELSSNLLGYAWQLWNEQKAMEFIDPSLGNSCSPCQVLRCMHVGLLCVQDSAMDRPTMSSVVLMLGSETTILPTPIQPIFTIGRNPIEIDLSTESAEIISRNDVTVTMIVGR* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00688 866 SMART serkin_6 548 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00688 866 ProSitePatterns Serine/Threonine protein kinases active-site signature. 669 681 IPR008271 GO:0004672|GO:0006468
Eupl06g00688 866 Pfam S-locus glycoprotein domain 233 344 IPR000858 GO:0048544
Eupl06g00688 866 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 624 827 - -
Eupl06g00688 866 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 238 IPR036426 -
Eupl06g00688 866 CDD STKc_IRAK 554 819 - -
Eupl06g00688 866 PIRSF SRK 20 866 IPR024171 GO:0004674
Eupl06g00688 866 ProSiteProfiles Protein kinase domain profile. 548 834 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00688 866 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 35 810 - -
Eupl06g00688 866 ProSiteProfiles PAN/Apple domain profile. 365 449 IPR003609 -
Eupl06g00688 866 ProSiteProfiles Bulb-type lectin domain profile. 48 169 IPR001480 -
Eupl06g00688 866 Pfam Protein tyrosine and serine/threonine kinase 551 817 IPR001245 GO:0004672|GO:0006468
Eupl06g00688 866 Pfam Domain of unknown function (DUF3403) 821 866 IPR021820 GO:0004674
Eupl06g00688 866 CDD EGF_CA 311 344 - -
Eupl06g00688 866 SMART ntp_6 375 448 IPR003609 -
Eupl06g00688 866 Gene3D - 42 172 IPR036426 -
Eupl06g00688 866 Pfam D-mannose binding lectin 96 201 IPR001480 -
Eupl06g00688 866 ProSiteProfiles EGF-like domain profile. 310 346 IPR000742 -
Eupl06g00688 866 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 514 623 - -
Eupl06g00688 866 SUPERFAMILY Protein kinase-like (PK-like) 531 839 IPR011009 -
Eupl06g00688 866 SMART blect_4 54 175 IPR001480 -
Eupl06g00688 866 CDD PAN_AP_plant 361 449 - -
Eupl06g00688 866 Gene3D Phosphorylase Kinase; domain 1 523 623 - -
Eupl06g00688 866 Gene3D Transferase(Phosphotransferase) domain 1 624 825 - -
Eupl06g00688 866 SUPERFAMILY Hairpin loop containing domain-like 378 435 - -
Eupl06g00688 866 CDD B_lectin 55 175 IPR001480 -
Eupl06g00688 866 Pfam PAN-like domain 376 434 IPR003609 -
Eupl06g00688 866 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 44 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00688 Eupl-Chr6 10656086 10659829 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00688 493 866 Receptor kinase-like Gene Family AT4G23140 52.208 2.45e-133 412
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g00688 PK_Tyr_Ser-Thr 6.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00688 - - nnu:104605742 1212.21