Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00673 ATGGAGTCTCTGAGTTCAGTCATGGATAGTGTATACTGTAACGAAGATGAGAGCATCATCAATGGAAGGCCAGGTCGAGGGAACCACAAGAGAGAAAAGACAACAGAGTTCAAGTCTAAGAATCTTGAAGCTGAGAGGAATAGGAGGCAAAAACTCGACGGCAGACTCATGGCTTTACGTACAGTAGTCCCAATCATCACAAATATGAAAAAAGCAACGATCATCGACGATGCCATCACATACGTAAAGGGGTTACAAAAGAAAGCGAAGGGTCTCAGTGACGAGCTCCATGAGATGGAATCAGTATCTGAAGAAGGAGGAGAAAAGCCAGTGAGCGAGGACGATGATACCACTTACGAGGACATGGAGAAATGCAAGATAGAGGCAGAGGTTGATGTGAGTCATATAGATGGGAATAAGCTGTGGATAAAGATAATCCATGAGAGCAAGAGAGGTGAATTCACGAAATTGATGGAGGCCATGAGTTTTCTTGGTTTTGAAGTCACAAACACAAACGTTACCACCTACAAAGATGTTACTCTTACAATAATATGTGTGGAGGAAACGTGTGTTGAAATGGTTGCAGCCGAGCAAGTGAGGGAGTTTTTGCTTGAGATGATCGGAGGCGTCTACAAGAATGACATGTGTTTTTAA 654 0.4312 MESLSSVMDSVYCNEDESIINGRPGRGNHKREKTTEFKSKNLEAERNRRQKLDGRLMALRTVVPIITNMKKATIIDDAITYVKGLQKKAKGLSDELHEMESVSEEGGEKPVSEDDDTTYEDMEKCKIEAEVDVSHIDGNKLWIKIIHESKRGEFTKLMEAMSFLGFEVTNTNVTTYKDVTLTIICVEETCVEMVAAEQVREFLLEMIGGVYKNDMCF* 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00673 217 Pfam Helix-loop-helix DNA-binding domain 40 86 IPR011598 GO:0046983
Eupl06g00673 217 Gene3D - 27 101 IPR036638 GO:0046983
Eupl06g00673 217 MobiDBLite consensus disorder prediction 93 108 - -
Eupl06g00673 217 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 25 207 - -
Eupl06g00673 217 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 36 85 IPR011598 GO:0046983
Eupl06g00673 217 Coils Coil 82 102 - -
Eupl06g00673 217 MobiDBLite consensus disorder prediction 93 116 - -
Eupl06g00673 217 SMART finulus 42 91 IPR011598 GO:0046983
Eupl06g00673 217 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 100 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00673 Eupl-Chr6 10201790 10202954 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00673 24 207 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G21330 44.162 7.22e-43 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl06g00673 HLH 3.6e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00673 - - vvi:100853869 196.052