Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00658 ATGGATACGCACCAGAATTTCAGGTATGGTTTGACTAGTGCGGACATATCCTGCGAAATTTCTCATGCCAGTACTCCAGCGATCTCCGAATGGATGGTTGGGCCCATGAAACTTGACTTGGGGAGCTCGCCTAGCTCGCCTCTTTCCACTCATTTCGACTCTGACACCTTTACTACATTGAGCAACAGCCAAGAGCAGTACAGCTCCACAGATAATCTCTCAGGGATCAGCCCTTCCTGTAATTCTTCATTAGAGATCAACAGTTCTTTCCATCAGATCAGCCCTTCTCCAACCCATTTTCGAGACAGTCTACAGCTTTGTTCTGGTGGGAGTTCAGTCTTGCAGGATGCAAATTATGATAATAGCATGAAGCACGCTCTACAGGAAATAGAAACTGCTCTAATGGGTCCTGATGCTGCTGAAGACGAAGCAACCACTTCTGGTGCTGTTTTTGATGGGAATAAGCATCCAGAAATTTTGAGTCAGAGATCAAAGGCCTGGAGCCAAGAACCTCGACAAGGGCCGCATGTGATTCAACCTCAGCCATCCTTTACTGCTAAGTATCAGAAATCGAGCCATGGAGTCCAGGCAGAGAAACGCCACAGAATGATAGAGGCATTGTCACAGGAAATTCCATGGGGTGATTTGAAGCTGTTGCTGACTGAGTGTGCGAAGGCTCTCTCTGAAAACAGGATGGGTGACTTTGAGAAATTGATTCAGGAGGCCAGAAATGCTGTATCCATCAGTGGAGAACCAACCCAGCGTCTTGGTGCTTACATGGTAGAAGGGCTGGTAGCGAGAAAGGAGGCGTCAGGCACCAAAATATACCGTGCACTGAGGTGTAGAGAACCAGAAGGCAAGGAGTTGCTCACGTACATGCATATTCTGTATGATATCTGCCCATACATGAAGTTTGGTTACATGGCAGCCAATGGCGCGATTGCCGAAGCATTCAGAAATGAGGACCGGGTCCACATCATTGATTTCCAGATTGCTCAGGGTACCCAGTGGATGACTCTGATACAAGCACTGGCAGCAAGGCCAAGTGGACCTCCTCATGTGCGGATCACCGGGATCGACGACCCATTCAATAAGTACGCCCGAGGTGACAGTTTGGAGGCGGTTGGGAAGAGGTTAGCTGCAATTTCTGAGAAGTTCAAAATTTCGGTTGAGTTCCATGCAGTGCCTGTCTTTGCACCGGACATCACACGCGAGATGCTTGACGTGAGGCCTGGGGAGGCTCTGGCTGTGAACTTTCCCCTTCAGCTCCACCACACCCCGGATGAGAGCGTTGACGTGAACAACCCAAGGGACGGGCTGCTAAGGATGATTAGGTCACTGTCACCCAAGGTGACCACCCTGGTTGAGCAGGAGTCAAACACGAACACAACCCCATTCTTAATGAGGTTTGTAGAGACCCTAGATTTCTACTCGGCAATGTTCGAGTCGATTGACGTTACTATGCCGAGGGACAGCAAGGAGCGGATCAATGTGGAGGAGCATTGCCTGGCGAGGGACATTGTTAACATCATTGCGTGCGAGGGGAAAGAAAGGGTGGAGCGACACGAGCTGCTTGGAAAGTGGAAGTCTAGGTTTACAATGGCGGGGTTCCAACCTTTCCCATTGAGCTCCTATGTCAACTCTGTGATAGGGAGTCTGCTGAGGTGTTACTCGGACCACTACACACTGGTGGAGAAGGATGGGGCCATGCTGCTGGGGTGGAAGGACAGGAACTTGATCTCAGCTTCTGCCTGGCACTGA 1761 0.5014 MDTHQNFRYGLTSADISCEISHASTPAISEWMVGPMKLDLGSSPSSPLSTHFDSDTFTTLSNSQEQYSSTDNLSGISPSCNSSLEINSSFHQISPSPTHFRDSLQLCSGGSSVLQDANYDNSMKHALQEIETALMGPDAAEDEATTSGAVFDGNKHPEILSQRSKAWSQEPRQGPHVIQPQPSFTAKYQKSSHGVQAEKRHRMIEALSQEIPWGDLKLLLTECAKALSENRMGDFEKLIQEARNAVSISGEPTQRLGAYMVEGLVARKEASGTKIYRALRCREPEGKELLTYMHILYDICPYMKFGYMAANGAIAEAFRNEDRVHIIDFQIAQGTQWMTLIQALAARPSGPPHVRITGIDDPFNKYARGDSLEAVGKRLAAISEKFKISVEFHAVPVFAPDITREMLDVRPGEALAVNFPLQLHHTPDESVDVNNPRDGLLRMIRSLSPKVTTLVEQESNTNTTPFLMRFVETLDFYSAMFESIDVTMPRDSKERINVEEHCLARDIVNIIACEGKERVERHELLGKWKSRFTMAGFQPFPLSSYVNSVIGSLLRCYSDHYTLVEKDGAMLLGWKDRNLISASAWH* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00658 586 ProSiteProfiles GRAS family profile. 207 586 IPR005202 -
Eupl06g00658 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 154 582 IPR005202 -
Eupl06g00658 586 Pfam GRAS domain family 218 585 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00658 Eupl-Chr6 9988570 9990330 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00658 121 585 GRAS Transcription Factor Family AT5G48150 55.794 3.63e-179 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Eupl06g00658 GRAS 6.1e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00658 - - nnu:104604948 900.582