Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00656 ATGAAAGGCGTGTCTCGGGGGCTGATAATTGGGATTTCCATTGGGGTGATAATTGGAGTGCTTTTGGCTATTTCTGCTCTCTTCTGCGTTAGGTACCGCAGGAAGCGTTCACAGATAGTTAACAGTAGTTCTCGGAGGGCGGTGACCATCCCAATCCGAGTTAATGGCATTGATTCTTGTTCGATAATGTCGGATTCGACCATTGGTCAGGAATCACCCAAAACATCTGAAAGGAATAATGGCATGTCCTTGTGGCTGGAAGGACCTAGGAAGAAGAAAACAGTCTCTGTATCTGGAATACCTAAATATTCTTACAAAGATCTGCATAAAGCAACTTATAATTTTACAACTGTGATAGGACAAGGGGCATTTGGTCCTGTGTACAAAGCTAAGATGTCAACTGGAGAGACTGTTGCAGTTAAAGTGCTTGCTACTGACTCTAAGCAAGGGGAGAAGGAATTCCAAACAGAGGTTCTGCTACTTGGAAGATTACACCACAGGAACCTTGTGAATTTGGTGGGATATTGTGCAGAAAAAGGCCAGCATATGCTTGTATATGTGTACATGAGTAATGGCAGTCTTGCTTCTCATTTATATAGTGAAAAACATGAACCATTGAACTGGGATTTGAGAGTTTATATAGCTCTAGATGTAGCAAGGGGTTTGGAGTATCTTCATGATGGGGCTGTTCCACCAGTTGTGCACCGGGACATCAAGTCTTCCAACATACTGTTGGATCGGTCCATGAGAGCTAGAGTTGCTGACTTTGGGCTTTCAAGGGAAGAGGTTGTTAACCAGCATGCATCTAATGTCAGGGGAACTTATGGCTATCTTGATCCTGAGTATGTATCAACAAGGGCTTTCACTAAGAAAAGTGATGTTTACAGTTATGGAGTGTTGCTCTTTGAACTTGTTGCAGGCAGGAATCCCCAACATGGCCTCATGGAATATGTTGAGCTTGCAGCAATGAATATGGAGGGAAGTGTTGGTTGGGAGGAGATTGTGGATTCCTGTCTCGACGGGAAATTCGATGTGCATGAACTCAATGACGTGGCGGCCCTTGCATACAAATGCATCAACAGTATCTCAAGAAAACGGCCTTCCATGAGGGACATTGTGCAGGCTCTGTGTCAGATCATTAAGTTGAGGCACAGTAAGAAGCATCACCAGCGAGCCTCATCTGTTACAGAGGAGGATGTAGCCATCGATGTAGACCAACAATCAGAAACTCAAATTCCAATCAATGGACTTCGGAGAGAGGAATCTACAGACAGCATGGCAGACCCATCTTAA 1293 0.4424 MKGVSRGLIIGISIGVIIGVLLAISALFCVRYRRKRSQIVNSSSRRAVTIPIRVNGIDSCSIMSDSTIGQESPKTSERNNGMSLWLEGPRKKKTVSVSGIPKYSYKDLHKATYNFTTVIGQGAFGPVYKAKMSTGETVAVKVLATDSKQGEKEFQTEVLLLGRLHHRNLVNLVGYCAEKGQHMLVYVYMSNGSLASHLYSEKHEPLNWDLRVYIALDVARGLEYLHDGAVPPVVHRDIKSSNILLDRSMRARVADFGLSREEVVNQHASNVRGTYGYLDPEYVSTRAFTKKSDVYSYGVLLFELVAGRNPQHGLMEYVELAAMNMEGSVGWEEIVDSCLDGKFDVHELNDVAALAYKCINSISRKRPSMRDIVQALCQIIKLRHSKKHHQRASSVTEEDVAIDVDQQSETQIPINGLRREESTDSMADPS* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00656 430 SUPERFAMILY Protein kinase-like (PK-like) 101 388 IPR011009 -
Eupl06g00656 430 MobiDBLite consensus disorder prediction 388 430 - -
Eupl06g00656 430 FunFam Calcium/calmodulin-regulated receptor-like kinase 1 87 188 - -
Eupl06g00656 430 Gene3D Phosphorylase Kinase; domain 1 87 188 - -
Eupl06g00656 430 Pfam Protein tyrosine and serine/threonine kinase 115 376 IPR001245 GO:0004672|GO:0006468
Eupl06g00656 430 PANTHER OS01G0750732 PROTEIN 3 404 - -
Eupl06g00656 430 ProSiteProfiles Protein kinase domain profile. 113 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00656 430 Gene3D Transferase(Phosphotransferase) domain 1 189 405 - -
Eupl06g00656 430 FunFam calcium/calmodulin-regulated receptor-like kinase 1 189 398 - -
Eupl06g00656 430 CDD STKc_IRAK 119 379 - -
Eupl06g00656 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 233 245 IPR008271 GO:0004672|GO:0006468
Eupl06g00656 430 SMART serkin_6 113 381 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00656 Eupl-Chr6 9950816 9965298 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00656 71 376 Glycoside Hydrolase AT3G07070 44.062 5.06e-74 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Eupl06g00656 PK_Tyr_Ser-Thr 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00656 - - nnu:104604947 685.256