Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00653 ATGCCAACAGTTTGGTTTTCTCTAAAGAGATCCCTCCATTGCAAATCAGATCCATCAGATGTTCATGATCCAAAGGCTAGGAGCCATTTGAGCACCATCTTAACAAGAAAAACAGGTAGGTCTGGCTGTTCAAGGTCCATAGCAAACCTCAAAGATGTCATCCATGGAAGCAAGAGACACTTAGAAAAGCCTCCAAGTTGTAGTCCAAGATCTATTGGGAGCAATGAATTCCTTAACCCAATAACCCATGAAGTTATTCTCAGTAATTCCAGGTGTGAGCTTAAGATAACTGGTCTTGGAGGTTTTCATGAAGGTGGTGGTGGTGGAGGTGGTGCTAGTGCTGGTGGTGGCTCAACCTTTGTGGGTACACTTAGGCCTGGGACACCTGGCCCTGGAGGACAACACACCACGCAATATTATAACCCTTCTTTTAGGAGCTCAGCCACTCCTCCTAAAAAGTCTCCTAGCTTTCTTTCTGATAGAGAAGGTTCTGGATTTGGAGATTCTGCTAGTTTAGGTGGTGGTGGTGGTATTACTTCAAACCCTAGGGCTTCCCATTATGTGTATTCTAATGGGTCTTCTACCGTGACTTGCCATAAATGTGGAGAGCAGTTTGGGAAATGGGAAGCTGCAGAAGCACATCACCTCTCCAAACATGCTGTCACTGAACTCGTTGAAGGAGACTCGTCTCGAAAAATTGTAGAGATAATTTGCCGGACAAGCTGGTTGAAGTCTGAAAACAACTGCGGGCGGATTGAGAGGGTTTTGAAGGTTCACAATATGCAAAAGACTCTTGCTCGGTTTGAAGAATACAGGGAGATAGTGAAGATCAAAGCCAGCAAACTCTCCAAGAAACACCCCCGTTGCCTGGCTGATGGGAATGAACTATTGAGGTTCTATGGCACAACTTTGGTATGCTCTCTTGGTGTGAACGGCTCCTCCAATCTTTGTGCATCAGAGAAATGTAGTGTCTGTCAGATTATAAGACATGGGTTCTCCACCAAGGAGGAGCACAAGGGTGCTATAGGCGTTTTCACCACTTCGACGAGCGGAAGAGCCTTTGAATCTATCGAACTCTACGAAGAAAGCCCATCTATAAGGAAGGCTTTAATAGTCTGTAGAGTGATCGCTGGGAGGGTCCATAGACCTTTGGAGAACTTCCAAGAACTTGCTGGTCAATCGGGGTTCGACTCATTGGCCGGGAAAGTGGGTCTTTATTCAAATATTGAAGAGCTCTATTTACTCAATCCTAGAGCTCTCCTTCCTTGTTTTGTGGTAATCTGTAAACCCTGA 1293 0.454 MPTVWFSLKRSLHCKSDPSDVHDPKARSHLSTILTRKTGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSNEFLNPITHEVILSNSRCELKITGLGGFHEGGGGGGGASAGGGSTFVGTLRPGTPGPGGQHTTQYYNPSFRSSATPPKKSPSFLSDREGSGFGDSASLGGGGGITSNPRASHYVYSNGSSTVTCHKCGEQFGKWEAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENNCGRIERVLKVHNMQKTLARFEEYREIVKIKASKLSKKHPRCLADGNELLRFYGTTLVCSLGVNGSSNLCASEKCSVCQIIRHGFSTKEEHKGAIGVFTTSTSGRAFESIELYEESPSIRKALIVCRVIAGRVHRPLENFQELAGQSGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00653 430 Gene3D - 211 429 - -
Eupl06g00653 430 SUPERFAMILY ADP-ribosylation 221 429 - -
Eupl06g00653 430 ProSitePatterns Zinc finger C2H2 type domain signature. 198 219 IPR013087 -
Eupl06g00653 430 FunFam C2H2-like zinc finger protein 220 429 - -
Eupl06g00653 430 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 428 - -
Eupl06g00653 430 MobiDBLite consensus disorder prediction 107 177 - -
Eupl06g00653 430 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00653 Eupl-Chr6 9887099 9890073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00653 1 430 C2H2 Transcription Factor Family AT5G54630 64.052 0.0 555
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Eupl06g00653 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00653 - - nnu:104604941 728.013