Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00642 ATGGTTTCACCTGAAAACCCCAATTGGCTCTTTGATTACGGCTTGATCGACGATATTCCAGTTCCAGGAGGAGAATTTCCGGCGCCGGCCGCCGGATTTCAGTGGCCTTCTCAGGCCTTGAACGGTTCTACTAGTGTCAGTGTGGAAATTGACGGCTCGTTTGGGGATTCAGATGGTGTCAAAGAAATGGGCTCTCGAAAACGGATGAGGTCTGAAACATGCAGTGCATCTGGCTCCAAAGCATGTAGGGAGAAAATGCGAAGAGATAGGCTGAATGACAGGTTCCTGGAATTAGGTTCCATCCTGGAGCCTGGAAGGCCGCCCAAAATGGACAAGGCTGCTATATTGAGTGATGCTGTCCGTATGGTGACTCAGTTACGGGGTGAAGCCCAGAAACTGAAGGAATCAAATGAGAATCTCCATGAGAAGATTAAAGAGTTGAAGGCTGAGAAAAACGAGCTTCGTGATGAGAAGCAGAGGCTAAAGGCAGAGAAAGAGAAGCTTGAAATGCAAGTCAAAGCCATGAGTGCTCAACCAGGCTACCTGCCTCACCCTTCCACAATCCCGGCAGCGTTTGCTGCCCAAGGCCATGTGGCTGGCAACAAGATGATGCCATTCATTGGCTACCCGGGAGTTGCCATGTGGCAATTCATGCCGCCTGCTGCAGTTGATACCTCGCAGGATCATGTTCTCCGCCCCCCAGTCGCTTAA 711 0.5077 MVSPENPNWLFDYGLIDDIPVPGGEFPAPAAGFQWPSQALNGSTSVSVEIDGSFGDSDGVKEMGSRKRMRSETCSASGSKACREKMRRDRLNDRFLELGSILEPGRPPKMDKAAILSDAVRMVTQLRGEAQKLKESNENLHEKIKELKAEKNELRDEKQRLKAEKEKLEMQVKAMSAQPGYLPHPSTIPAAFAAQGHVAGNKMMPFIGYPGVAMWQFMPPAAVDTSQDHVLRPPVA* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00642 236 FunFam Transcription factor bHLH34 66 124 - -
Eupl06g00642 236 Gene3D arf6 gtpase in complex with a specific effector, jip4 125 179 - -
Eupl06g00642 236 PANTHER BHLH TRANSCRIPTION FACTOR 5 236 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Eupl06g00642 236 SMART finulus 81 132 IPR011598 GO:0046983
Eupl06g00642 236 CDD bZIP 142 173 - -
Eupl06g00642 236 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 75 126 IPR011598 GO:0046983
Eupl06g00642 236 MobiDBLite consensus disorder prediction 53 73 - -
Eupl06g00642 236 Pfam Helix-loop-helix DNA-binding domain 79 126 IPR011598 GO:0046983
Eupl06g00642 236 CDD bHLH_AtILR3_like 80 155 - -
Eupl06g00642 236 Coils Coil 116 178 - -
Eupl06g00642 236 Gene3D - 64 124 IPR036638 GO:0046983
Eupl06g00642 236 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 151 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00642 Eupl-Chr6 9754517 9773471 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00642 1 236 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 68.201 9.48e-109 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Eupl06g00642 HLH 2.9e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00642 - - nnu:104604927 407.912