Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00635 ATGAGTTGCTATGAATTCCTCTTCTTTCTTTCCACCCTACTCATCCACTTTGCTCCCATCACCGCCCAACCACACTACAGACTCGAATCTTGTTCAGAAGCTAATAATTACACTGCAAATAGCACATTTGAGAGTAACCTCAACCTTCTACTCTCTTCTTTATCCTCTAATAACGCTATATTTGATACCGGATATTATAACACCACCGCGGGCCGGATTCCGGATACAGTCTATGGCTCCTTCCTATGTAGAGGTGATCTTACTTCTGAAGTCTGCAGGAATTGTGTCGTGGCCGCAACTGAAGTGATCATAGATCGTTGCCCAAACAAGAAAGAGTCAATTATATGGTACGATGAGTGTATGTTACGCTACTCCAACCAATCTTTCTTCTCAACCATGCAGGACAACCCTTCTTTTTTATTGTGGAATCAGAACAGTTACTCCGACCCCGTTTGGTATAAAGAGAATTTGGCAGATTTCATTTCCAGCCTTGTGACGAACAGTTCTAGCACTATGTTTGCAACAGGAGAAACGAATTCGACGGTCAATCCGAAGATATATGGGTTAGTTCAATGCACTCCAGATATATCTCAAATTGATTGCAGCAGATGCCTACGAGGAGCCGTGGGTTTACTTCCACAAATCGGCGAAGGGAGAGTAGGTGGAAGAGTTGTTCGACCGAATTGTAATATTAGATACGAGATATTCCGTTTCTTTGAATCCAAGGCGTCGACCATCAATAAAGGAGATAAGAACGTCGGGAGAATTGTTGGACTTGTGGTTATCCCAGTTGTTACCGCAGTACTGTTAACCTCTGCCATTTGCACTTGCTTGTTCCGGAGGGAAGTTGTGAGGAAAAGAAATGCATACAGGGAAAACACATTGGTTCATTTGGATGAAAGTGACCAAACTGCTAATGACCACAAGCTTAGAGAAGATCAGAGTAGAGGCATAGATGTACCCTTTCTTGATTTTGAAAGCATACTTGTGGCTACTGAGAACTTTTCAAACTCAAATAAGCTTGGACAAGGGGGGTTTGGTCCTGTGTACAAGGGTAAGTTGCCAAAAGGACAAGAAGTAGCTGTGAAAAGGCTCTCGAGGAGTTCTGGACAAGGTCTTGAAGAATTTAAAAATGAGGTTTTATTGATTGCGAAACTTCAACACAGGAATCTTGTTAGGCTTTTAGGTTATTGTATCAAAGGAGATGAAAAGATGCTGCTCTACGAATACATGCCCAACAAAAGCTTAGACTTCTTTATCTTTGATCAAACTCAACGCTTGTTATTAAACTGGGAAAAACGCTTCAACATCATTTTGGGAATTGCTCGAGGAATTCTTTATCTTCATCAAGATTCTAGGTTGAAAATTATTCATAGAGATTTAAAAACCAGCAACATTCTTCTAGATCAAGAGATGAACCCGAAAATTTCAGACTTCGGAATGGCAAGGATATTTGGCGGAAATCAAACTCAAGAAAATACTAATAGAGTGGTTGGAACATATGGCTATATGTCTCCTGAGTATGCATTAGATGGGCTTTTCTCAGTTAAATCTGATGTGTTTAGCTTTGGCGTCATACTACTAGAAGTCATCAGCGGGAAGAGGAACACTGCTTTTTATCAAACAGGGGACTCTTTGAGCCTCATAGGACATGCATGGAGATTATGGAAAGAAGACAAGGCGTTGGATTTAATTGACCATTCATTATGTGAAGAATGTAATACATGTGAAGTTTTGAAGTGCATTCATATTGGCCTTTTGTGTGTGCAAGAAGATGCAAATGATCGACCCACCATGTCTAACTTAGTTTTCATGCTAGGCAGTGAATCCACAACTTTTTCAACTCCTAAGCAACCGGCTTTTGTTCTAAGGAGATGCATGTCTAGCACGGCTTCTTCTAGTAGACCGGAAATATTTTCCAATAATGAGTTAACGGTTACTGTTCAAGAAGGTCGGTGA 1959 0.4074 MSCYEFLFFLSTLLIHFAPITAQPHYRLESCSEANNYTANSTFESNLNLLLSSLSSNNAIFDTGYYNTTAGRIPDTVYGSFLCRGDLTSEVCRNCVVAATEVIIDRCPNKKESIIWYDECMLRYSNQSFFSTMQDNPSFLLWNQNSYSDPVWYKENLADFISSLVTNSSSTMFATGETNSTVNPKIYGLVQCTPDISQIDCSRCLRGAVGLLPQIGEGRVGGRVVRPNCNIRYEIFRFFESKASTINKGDKNVGRIVGLVVIPVVTAVLLTSAICTCLFRREVVRKRNAYRENTLVHLDESDQTANDHKLREDQSRGIDVPFLDFESILVATENFSNSNKLGQGGFGPVYKGKLPKGQEVAVKRLSRSSGQGLEEFKNEVLLIAKLQHRNLVRLLGYCIKGDEKMLLYEYMPNKSLDFFIFDQTQRLLLNWEKRFNIILGIARGILYLHQDSRLKIIHRDLKTSNILLDQEMNPKISDFGMARIFGGNQTQENTNRVVGTYGYMSPEYALDGLFSVKSDVFSFGVILLEVISGKRNTAFYQTGDSLSLIGHAWRLWKEDKALDLIDHSLCEECNTCEVLKCIHIGLLCVQEDANDRPTMSNLVFMLGSESTTFSTPKQPAFVLRRCMSSTASSSRPEIFSNNELTVTVQEGR* 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00635 652 Gene3D Phosphorylase Kinase; domain 1 297 410 - -
Eupl06g00635 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 129 - -
Eupl06g00635 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 29 652 - -
Eupl06g00635 652 FunFam Putative G-type lectin S-receptor-like serine/threonine-protein kinase 297 410 - -
Eupl06g00635 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Eupl06g00635 652 Gene3D Transferase(Phosphotransferase) domain 1 411 619 - -
Eupl06g00635 652 ProSiteProfiles Gnk2-homologous domain profile. 25 129 IPR002902 -
Eupl06g00635 652 Gene3D - 25 129 IPR038408 -
Eupl06g00635 652 Gene3D - 137 238 IPR038408 -
Eupl06g00635 652 SUPERFAMILY Protein kinase-like (PK-like) 321 634 IPR011009 -
Eupl06g00635 652 Pfam Salt stress response/antifungal 31 127 IPR002902 -
Eupl06g00635 652 Pfam Salt stress response/antifungal 146 234 IPR002902 -
Eupl06g00635 652 ProSiteProfiles Protein kinase domain profile. 335 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00635 652 CDD STKc_IRAK 341 606 - -
Eupl06g00635 652 ProSiteProfiles Gnk2-homologous domain profile. 135 238 IPR002902 -
Eupl06g00635 652 Pfam Protein tyrosine and serine/threonine kinase 338 604 IPR001245 GO:0004672|GO:0006468
Eupl06g00635 652 SMART serkin_6 335 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00635 652 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 411 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00635 Eupl-Chr6 9408577 9413635 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00635 13 624 Receptor kinase-like Gene Family AT4G05200 47.806 0.0 593
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g00635 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00635 - - nnu:104590182 650.588