Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00629 ATGAAGATGATGATGATCATGTCTTGTTTCCAAGTCCCAAGAACCGTTCGATTAATGTTCATCTTGTTTTCTTCCATACTCCTCGTGATGCTCATTACTCCCGTCAGCGCCACCCCCACTTACCGATGGCACTTCTGTTCCAATATAGGTAATTACACGCGAAACAGCACGTACCAGTTTAATGTTAACATCCTCCTCTTCGATTCACTATACTCCCAAGTAGGAACCTCCGGTTTCTCCAACGGAACAATAGGTGAAGGCGAGAACAAAATCTATGGCCTAGAACTATGTAGAGGGGATCTTAATCCTCAACAATGCCAGAATTGTATTTACAGTGCAGGTCCAGATATGTTAATACGATGCTCCCGACGGAAAGAAGCTATCATATGGTATGATAAGTGTCTTCTGCGATACTCCAACCGATCTTTCTTCTCCATCATTGAGTCATCACCAGCGCTTTATATTGGGAACCCGAAGAATATATCAGACGATCCAGATCGATTCATGCAGCTGGTTGGGGAGACGATGGACAACCTTGTGGTGCAGGCTACTTTGAATGCTTCAACCCGTATGTATGCTACCGGAGTAGTTAATTTTACGGGGTCTATGAAGTTGTATGGTCTTGTGCAGTGTACTAGAGATATATCGGAGAGTGATTGTAACAGATGTCTTCGAGGGGCGATTGCGAATCTTTCGACGTGCTGCCATGGGAAGGATGGGGCAAGTGTTTTTCTACCGAATTGTATTTTGAGGTACGAGATATACCCATTTTACAATGAGAGCACAGCTGCAGCACCTGGTCCTTCTCCTACAATCATGGACGGTGAAGGAAGGAAAACAAGTATTGTAATCTTTACTAGTGTAGCAGCAGTTCTGGTGGTAGTTCTTTTGGGTTCCTATGTCTACTATCGGAGGAGGAAAGGAACACAGAAAGAGAAGAAGGAGAGTAACCAAAAGGCTCAACTATATAAGTTGGAGGCTGAAATTGGTGTAGAATTCCAACATGGTAAGATGCAAGGAGGAAATCAGATTCAAGCACAGGACTTGCCCTTGATTCCTCTAGATACCATACTAGCAGCTACATACAACTTTTCTGATGCAAATAAGCTTGGAGAGGGTGGGTTTGGCCCTGTTTACAAGGGTATGCTACCTGATGGAAAGGAAATTGCAGTAAAGAGGTTCTTGAGGAGCTCTGTACAAGGTTTAGAGGAGTTCAAGAATGAGGTTATTCTAATTGCCAAACTTCAACACAGAAATTTGGTTAGGCTATGGGGTTGTTGCATAGAGGAAGAAGAAAGGCTTCTCATTTACGAATATATGCCCAACACCAGCCTTGATGTCTTTCTTTTCGATCCATTGAAACGAGCACAACTAGACTGGAAAAGACGCATGAACATAATTGGTGGAATTGCACGGGGGCTTCTTTATCTTCACGAGGACTCTCGACTCCGAATCATTCACAGGGATCTAAAAGCAAGCAATGTTTTGCTCGACAATGAGATGAATGCAAAGATATCAGACTTTGGAATGGCAAGGATTTTTGGAGGAGATCAGAATCACGCAAATACCAATAGAATTGTTGGTACATATGGATACATGGCCCCGGAATATGCAATGGAAGGGCAATTTTCTGTGAAGTCGGACGTTTTCAGCTTTGGAGTTCTTTTGCTGGAGATAATTAGTGGGAAAAGGAACAGTCGCTTCCATCTTTCAGAACATGCTCAAAGCCTCCTCAAATATGCATGGGGACTATGGTGTGAAGACAAAGGTTTGGATCTGATGGACCCATTGTTAGCGGCGTCTTGTGACACAAATGAAGTGCTGAAATGTATTCATATAGGGTTGTTGTGTGTTCAAGAAGATGCAGCAGACAGACCCACCATGTCGTCTGTGGTTGTTACCTTGGCAAGTAACTCTGTAACCCTTCCTCAACCTACACAGCCTGCATTTTCTGTTGGACGCGTTATTGTCGCATCAGACAAATCTTCGTCAAGTGGCGGTAATAATTTTTCCAGCAATGACATTACTGTTTCTGACATTGCTCCCCGATAA 2052 0.4337 MKMMMIMSCFQVPRTVRLMFILFSSILLVMLITPVSATPTYRWHFCSNIGNYTRNSTYQFNVNILLFDSLYSQVGTSGFSNGTIGEGENKIYGLELCRGDLNPQQCQNCIYSAGPDMLIRCSRRKEAIIWYDKCLLRYSNRSFFSIIESSPALYIGNPKNISDDPDRFMQLVGETMDNLVVQATLNASTRMYATGVVNFTGSMKLYGLVQCTRDISESDCNRCLRGAIANLSTCCHGKDGASVFLPNCILRYEIYPFYNESTAAAPGPSPTIMDGEGRKTSIVIFTSVAAVLVVVLLGSYVYYRRRKGTQKEKKESNQKAQLYKLEAEIGVEFQHGKMQGGNQIQAQDLPLIPLDTILAATYNFSDANKLGEGGFGPVYKGMLPDGKEIAVKRFLRSSVQGLEEFKNEVILIAKLQHRNLVRLWGCCIEEEERLLIYEYMPNTSLDVFLFDPLKRAQLDWKRRMNIIGGIARGLLYLHEDSRLRIIHRDLKASNVLLDNEMNAKISDFGMARIFGGDQNHANTNRIVGTYGYMAPEYAMEGQFSVKSDVFSFGVLLLEIISGKRNSRFHLSEHAQSLLKYAWGLWCEDKGLDLMDPLLAASCDTNEVLKCIHIGLLCVQEDAADRPTMSSVVVTLASNSVTLPQPTQPAFSVGRVIVASDKSSSSGGNNFSSNDITVSDIAPR* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00629 683 Gene3D Phosphorylase Kinase; domain 1 325 439 - -
Eupl06g00629 683 ProSiteProfiles Gnk2-homologous domain profile. 149 257 IPR002902 -
Eupl06g00629 683 FunFam Uncharacterized protein 440 641 - -
Eupl06g00629 683 SMART serkin_6 364 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00629 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Eupl06g00629 683 ProSiteProfiles Gnk2-homologous domain profile. 40 143 IPR002902 -
Eupl06g00629 683 Gene3D - 39 143 IPR038408 -
Eupl06g00629 683 Gene3D - 152 257 IPR038408 -
Eupl06g00629 683 Pfam Salt stress response/antifungal 46 140 IPR002902 -
Eupl06g00629 683 Pfam Salt stress response/antifungal 163 254 IPR002902 -
Eupl06g00629 683 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 329 439 - -
Eupl06g00629 683 Gene3D Transferase(Phosphotransferase) domain 1 440 644 - -
Eupl06g00629 683 ProSiteProfiles Protein kinase domain profile. 364 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Eupl06g00629 683 Pfam Domain of unknown function (DUF3403) 637 683 IPR021820 GO:0004674
Eupl06g00629 683 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 39 143 - -
Eupl06g00629 683 CDD STKc_IRAK 370 635 - -
Eupl06g00629 683 SUPERFAMILY Protein kinase-like (PK-like) 350 649 IPR011009 -
Eupl06g00629 683 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 89 679 - -
Eupl06g00629 683 Pfam Protein tyrosine and serine/threonine kinase 368 633 IPR001245 GO:0004672|GO:0006468
Eupl06g00629 683 FunFam Cysteine-rich receptor-like protein kinase 10 152 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00629 Eupl-Chr6 9275394 9280610 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00629 25 683 Receptor kinase-like Gene Family AT4G05200 44.315 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Eupl06g00629 PK_Tyr_Ser-Thr 3.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00629 - - nnu:104604996 713.375