Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00628 ATGTGCAGAGGTAGGGAAGAAGGGAGACACCAGAGCAGCTTTAGCAGGTCCGAGTCGTCCATAGAAGTGGTTTCAGGCCATGCAACCATGGGCTTGATCTTCTGTGAGCTCTGCAGTTCACGAGCTTCACTATACTGTCAAGCAGATGATGCGTTTTTATGCCAAAAATGTGACAAACAAGTCCATGGAGCTAATTTCTTGGCACTAAGGCATGTTAGATGTTTGCTGTGTGTGACGTGTCAAAATTTTACAGGAGGATACCTTATCGGATATTCATACAAATTAGCACTTCTAACCAATGGCAAGAGAAGGAGATGTAATTCAAAAGTTAGCAAGAAGTGCTCAAGAATCACCAAGAAAAGAACTTTTTTATCTCATTGA 381 0.4199 MCRGREEGRHQSSFSRSESSIEVVSGHATMGLIFCELCSSRASLYCQADDAFLCQKCDKQVHGANFLALRHVRCLLCVTCQNFTGGYLIGYSYKLALLTNGKRRRCNSKVSKKCSRITKKRTFLSH* 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00628 126 Pfam B-box zinc finger 34 71 IPR000315 GO:0008270
Eupl06g00628 126 SMART bboxneu5 30 76 IPR000315 GO:0008270
Eupl06g00628 126 CDD Bbox1_BBX-like 35 76 - -
Eupl06g00628 126 ProSiteProfiles Zinc finger B-box type profile. 30 76 IPR000315 GO:0008270
Eupl06g00628 126 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 34 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00628 Eupl-Chr6 9258525 9259229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00628 33 90 C2C2-CO-like Transcription Factor Family AT3G21890 60.345 2.81e-20 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Eupl06g00628 zf-B_box 3.5e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00628 - - vvi:104880899 142.895