Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00627 ATGGAGCCTCTGTGTGAGTTCTGCGGAATGGAGAGGGCAGTGATTTATTGCAGATCGGACACTGCCCGTCTTTGCTTGCATTGTGATGGATGTGTCCACGCTGCCAATGCTCTTTCACGGCGTCATCTTCGTTCACTCATATGTGATAGATGTAACTCGCAGCCTGCGATAATTCGGTGCTTGGAAGATAAAATGTCTCTCTGTCAAGGCTGTGATTTGAACGGGCATGGCTGTTCACGGCCTGGGCATCAGAGAAAGCCAGTGAATTCATATTCAGGCTGTCCTTCTCTCCCAGAGGTCTCCAAAATCTTGTCCTCTGTTTTCGATTCTTCCTTTCCGTGGGAGGTTGATACCGGGTGGGTACCACAAGATGCGACGTCTATAAACGAGAATTGTTGCAGTAATTGGAAACCTGGGGAGAATGGGAGCTCGGTTGGGTTAACGGTGACCAGCAGGTTAAATGAGTTGAAACCTTGTGCAAAGTTTGAACCTTGGATGGGTCCAGCATCTGTGATTCCACCGAATGCAAATCCTATCCCATACAGTGGAGACCAACCACTGTTCCTTCCGAAGGAGCCAAACCTGTCGAAGGCATCATCATCAGGACAACATGATTGCATAGCTCTTCATTCTTCCCATGTTGCTGTGTCAGCCAGTGCTGTAAAGGTTGAAAATTGTAGTGCAGATCGAGTACTTTTAAATCCTAGTGGCAACACAAACATCAACTTAACTTTTCCTACTGCGCAAGTCCATTCAAGCATTTCACTTTCACTCTCCAACCTCACAGGCGAAAGCAGTGGTGTTGATTATCAAGATTGTGGAGTATCACCAATGTTTCTAACAGGTGAATCACCATGGGATTCAAACTTGGAAACTAGTTGCCCACAGGCCAGGGAAAAAGCAAAGATGAGATACTACGAAAAAAAGAAAAACCGCACATTTGGGAAACAAATAAGATATGCTTCTCGTAAAGCTAGGGCGGATACTAGAAAACGTGTGAAAGGTAGATTTGTGAAGGCTGGTGAAGCATATGACTATGATCCTATTGCAGAAATAGACGGCTGA 1065 0.4563 MEPLCEFCGMERAVIYCRSDTARLCLHCDGCVHAANALSRRHLRSLICDRCNSQPAIIRCLEDKMSLCQGCDLNGHGCSRPGHQRKPVNSYSGCPSLPEVSKILSSVFDSSFPWEVDTGWVPQDATSINENCCSNWKPGENGSSVGLTVTSRLNELKPCAKFEPWMGPASVIPPNANPIPYSGDQPLFLPKEPNLSKASSSGQHDCIALHSSHVAVSASAVKVENCSADRVLLNPSGNTNINLTFPTAQVHSSISLSLSNLTGESSGVDYQDCGVSPMFLTGESPWDSNLETSCPQAREKAKMRYYEKKKNRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPIAEIDG* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00627 354 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 343 - -
Eupl06g00627 354 Pfam CCT motif 298 340 IPR010402 GO:0005515
Eupl06g00627 354 Pfam B-box zinc finger 46 88 IPR000315 GO:0008270
Eupl06g00627 354 ProSiteProfiles Zinc finger B-box type profile. 43 88 IPR000315 GO:0008270
Eupl06g00627 354 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Eupl06g00627 354 ProSiteProfiles CCT domain profile. 298 340 IPR010402 GO:0005515
Eupl06g00627 354 SMART bboxneu5 1 47 IPR000315 GO:0008270
Eupl06g00627 354 SMART bboxneu5 48 88 IPR000315 GO:0008270
Eupl06g00627 354 CDD Bbox1_BBX-like 4 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00627 Eupl-Chr6 9243303 9252859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00627 1 348 C2C2-CO-like Transcription Factor Family AT3G21880 40.741 3.59e-82 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Eupl06g00627 CCT 4.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00627 - - qsu:111996076 407.142