Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00625 ATGGATACCATCTGCCGTCTCGATGTAGAGTTCTCAGATAAAATCGCTGCTCTTCTTAAACCCGCATCTCCTCACCAAGTTCAGGAGTACTTCGACGAGCTTACGACAACAAGGCAATGCAGTGGTCTCAAAATAAAACAAGACGCAGAGTTGGGAAAGGGTGCCTATGCGGAGTTGGAATTCAGAGAAGGGGAGCTTGTTTTGAAGGACCAAATGCTTGTTGGTGCTCAACACAGTTCGAATAAGGTTGACTGTTTTGTATGTAGCTACTGTTTTCGCTTTATTGGATCAATAGAACTTCAAATTGGGAGAAAACTCTATTTACAAGGTTTAGGATTATCTGCGAGCAAGGAGTGTGCATCTGATTCATCGGATGGAGAAGACAATTCCCTCATGACAGATCATGATAATTTGGGCGCATGCTCTTCTAGTGGTCCAAAAGAGAAAATTCCTCTCCCCAAGGAGGTTGTAGAATCATTAATTAATGGCAGCATGGTGTTGCCTTACTCGAAGCGGTTCTCATTGCCTTCAGCCATTCCGTGTCCTGGTGGGTGTGGAGAAGCACACTACTGCAGCAAGTCATGTGCGGAGGCTGATTGGGAATTGTTTCATTCTTTACTATGTACTGGGGAGAGCTCAGGATCCTCATGCAGGGAGGCACTTTTAAAGTTTATAGAACACGCTAATGAAACGAATGATATTTTCCTCCTTGCTGCCAAGGCAATTTCATCCACCATTTTAAGGTACAAGAAGTTGAAAGCAGATCATGTTGGACACCCAGAACAGTACAGTGGGCTAAATGGCATGGATGATTCTGGCTTTTCTCTGCTTTTGGAGGCCTGGAAACCAATATCAATGGGACACAAGAGAAGGTGGTGGGACTGTGTTGCTTTGCCAGATGATGTTGATTGTTGCAATGAAGCTTCATTTAGAATGCAAATAAGGGAACTAGCATTCACGTCACTGCAGCTCCTAAAGGAAGCTATCTTCAACAACGAATGTGCACCCTTATTTTCTCTCGAAATCTTTGGGCATTTAATTGGCATGTTTGAGTTAAATAATCTTGATTTGGTTGTAGCATCACCAGTGGAGGATTACTTTCTGTATATTGATGATCTTCCACATATGGAAAAGGAAGAAGCTGAGAGAATTACACGACCATTTCTGGATGCTCTTGAGGATGACTATCCAGTTTGTTGTCAAGGCTCTGCATTCTTCCCATTACAGAGTTGTATGAATCATTCCTGTCATCCTAATGCCAAAGCATTCAAAAGAGAGGAGGACAGAGATGGCCAGGCAACAATAATTGCACACAGACCCATTTGCAAGGGAGAAGAGATCACCATTTCATACATTGATGAGGACCTTCCTTTCGAAGAGAGACAAGCACTACTGGCAGATTATGGTTTCAGATGCAGGTGTCCCAAGTGCCTAGAGGAAGAGCCCTGA 1449 0.4348 MDTICRLDVEFSDKIAALLKPASPHQVQEYFDELTTTRQCSGLKIKQDAELGKGAYAELEFREGELVLKDQMLVGAQHSSNKVDCFVCSYCFRFIGSIELQIGRKLYLQGLGLSASKECASDSSDGEDNSLMTDHDNLGACSSSGPKEKIPLPKEVVESLINGSMVLPYSKRFSLPSAIPCPGGCGEAHYCSKSCAEADWELFHSLLCTGESSGSSCREALLKFIEHANETNDIFLLAAKAISSTILRYKKLKADHVGHPEQYSGLNGMDDSGFSLLLEAWKPISMGHKRRWWDCVALPDDVDCCNEASFRMQIRELAFTSLQLLKEAIFNNECAPLFSLEIFGHLIGMFELNNLDLVVASPVEDYFLYIDDLPHMEKEEAERITRPFLDALEDDYPVCCQGSAFFPLQSCMNHSCHPNAKAFKREEDRDGQATIIAHRPICKGEEITISYIDEDLPFEERQALLADYGFRCRCPKCLEEEP* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00625 482 CDD SET_SMYD 391 477 - -
Eupl06g00625 482 SUPERFAMILY SET domain 39 477 IPR046341 -
Eupl06g00625 482 ProSiteProfiles SET domain profile. 41 452 IPR001214 GO:0005515
Eupl06g00625 482 SUPERFAMILY HIT/MYND zinc finger-like 178 209 - -
Eupl06g00625 482 Pfam SET domain 394 451 IPR001214 GO:0005515
Eupl06g00625 482 Pfam MYND finger 179 208 IPR002893 -
Eupl06g00625 482 Gene3D - 158 210 - -
Eupl06g00625 482 Gene3D SET domain 374 481 IPR046341 -
Eupl06g00625 482 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 13 481 IPR044237 GO:0008168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Eupl06g00625 SET 8.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00625 - - tss:122639404 777.319