Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00618 ATGGGTTCTTTGGGTGTTAGAAAAGGTGCATGGACCAAAGAAGAAGATTTATTGCTGAGGAAATGCGTTGACAAGTATGGAGAAGGGAATTGGCATCGAGTACCTCCAAGAGCAGGCTTGAATCGGTGCCGTAAGAGTTGTAGGCTGAGATGGCTGAACTATCTCCACCCAAACATCAAGAGAGGAGGATTTACAGCAGATGAAGTCGACCTCATCATCAAGCTACATAAGCTCTTGGGCAATAGATGGGCGTTGATCGCAGGTAGACTTCCTGGCCGGACAGCGAATGACGTAAAGAACTATTGGAACTTTCACTTGAGCAAGAAGGTAACGGCACATGGCAAGGAAGTGAAGCCCAAACCTGAAAAGGTTGAAGTCATAAGGCCACGAGCTCGGACTTTAACCCCCAGATCAATTCAGTTCAGTAGTCTACAAGCTTCGGGAAGCCAACAACAAGAGCAAGACGGACATTGCAAGTCAAAGCCCTTAGACGAGCATACAATGTGGTGGAACAATTTAATAATTCTTAATGGTGAAGAGATGAACTAG 549 0.4572 MGSLGVRKGAWTKEEDLLLRKCVDKYGEGNWHRVPPRAGLNRCRKSCRLRWLNYLHPNIKRGGFTADEVDLIIKLHKLLGNRWALIAGRLPGRTANDVKNYWNFHLSKKVTAHGKEVKPKPEKVEVIRPRARTLTPRSIQFSSLQASGSQQQEQDGHCKSKPLDEHTMWWNNLIILNGEEMN* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00618 182 ProSiteProfiles Myb-like domain profile. 3 55 IPR001005 -
Eupl06g00618 182 SUPERFAMILY Homeodomain-like 5 102 IPR009057 -
Eupl06g00618 182 Gene3D - 63 130 - -
Eupl06g00618 182 SMART sant 60 108 IPR001005 -
Eupl06g00618 182 SMART sant 7 57 IPR001005 -
Eupl06g00618 182 FunFam Myb transcription factor 8 60 - -
Eupl06g00618 182 MobiDBLite consensus disorder prediction 141 162 - -
Eupl06g00618 182 Gene3D - 8 60 - -
Eupl06g00618 182 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 6 59 IPR017930 -
Eupl06g00618 182 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 60 110 IPR017930 -
Eupl06g00618 182 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 145 - -
Eupl06g00618 182 CDD SANT 10 55 IPR001005 -
Eupl06g00618 182 ProSiteProfiles Myb-like domain profile. 56 106 IPR001005 -
Eupl06g00618 182 CDD SANT 64 106 IPR001005 -
Eupl06g00618 182 MobiDBLite consensus disorder prediction 141 156 - -
Eupl06g00618 182 Pfam Myb-like DNA-binding domain 8 55 IPR001005 -
Eupl06g00618 182 Pfam Myb-like DNA-binding domain 61 105 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00618 Eupl-Chr6 9122712 9123742 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00618 5 138 MYB Transcription Factor Family AT1G66370 63.448 2.03e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Eupl06g00618 Myb_DNA-binding 7.8e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00618 - K09422 msin:131220542 226.483