Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00617 ATGAAGTCGACCTCATCATTAGGCTACATAAGCTCTTGGGCAATAGGCAAGTTGAAATCTTATCTTCCTTTCGTTTCTTATTCAATCAAGTCATCGATCTATCCTATTAAAATTGTTAATCGTCTCTTTCTTTTTTTCAGATGGGCATTGATCGCAGGTAGACTACCAGGCCGGACTGCAAATGACATAAAGAACTACTGGAACTCGCACTTGAGCAAAAAGTTAGCGGCACATGACAAGAAGCTGAAGCCCAAACCTGAAATGGTTAAAGTCATAAGACCACAAGCTCGGACTTTGATCCCTAGATCAATTCAATTAAATGGTCTACAAGCTTCAGGAAGCCAACAACAACCACAACAACAGGAAGTGGAACATTGCATGCCAAAGACCTTAGACGAGCATACCATGTGGTGGAACAATCTAATTCTTGATGGTGAAGAGATGAACCAGAGGTTATGCATCGACGTAGATATGGAGAAACGTTGTTTGTCGTCGACAAACTCTAAAAGAGGAGATATTGAGGCCCTGGGAGAAAAAAGGGGTAGTTTTTTGGACGGTGGAGGCCAGTGGGATGATCTTCTGGACATTTTTGGAGTTTGGAATGAGACATAA 612 0.4183 MKSTSSLGYISSWAIGKLKSYLPFVSYSIKSSIYPIKIVNRLFLFFRWALIAGRLPGRTANDIKNYWNSHLSKKLAAHDKKLKPKPEMVKVIRPQARTLIPRSIQLNGLQASGSQQQPQQQEVEHCMPKTLDEHTMWWNNLILDGEEMNQRLCIDVDMEKRCLSSTNSKRGDIEALGEKRGSFLDGGGQWDDLLDIFGVWNET* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00617 203 Gene3D - 36 93 - -
Eupl06g00617 203 Pfam Myb-like DNA-binding domain 47 71 IPR001005 -
Eupl06g00617 203 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 47 75 IPR017930 -
Eupl06g00617 203 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 47 119 - -
Eupl06g00617 203 SUPERFAMILY Homeodomain-like 46 76 IPR009057 -
Eupl06g00617 203 ProSiteProfiles Myb-like domain profile. 47 71 IPR001005 -
Eupl06g00617 203 CDD SANT 47 71 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00617 Eupl-Chr6 9109647 9110258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00617 47 94 MYB Transcription Factor Family AT1G66380 62.500 3.84e-14 64.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Eupl06g00617 Myb_DNA-binding 3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00617 - K09422 dzi:111283820 93.2041