Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00616 ATGCTCGAACGAAAGCTCTACAAGACGAAGCTTTGCGTACTGTATCAGAAAGGGCACTGTCCGCGTCAGAGCTGCTCATTTGCCCATGGCGATGCGGAGCTTAGGCGGTTCTCTGGTTCTTTTAATGGTAGGCGGGACCATCGAGGTAGTGACTTGAGGGATAAGCTTGACAGAAGGCAATCTCCCCAACGAAGATATTCCCCAGGGAGAGATGCAAGAGACCGACATTCATTTCATGGATATAGTCCTTCACGGTCCCCTGGGAAAAGGAGCGAGAGAGGACAGAGGAAGAAGCAGCATTTTGATGGCCAAAGTGATGTTTCTGGAAGTCTCAAGATCTCAGATGGTGCTGATGGAGTTAAAGAAGGGAAGGTCACATCCTATGGTGCCAAAGATGTTCTTGAAGAGCAGTTAAAGCAAGTACAGTTGGATATTGACATGCTCGATGATCATAAATGTCAACTTGAGATCTACCTGGAGGAGAGGGTCCAGGAAACTGATAGTCTTGCTTCCAGAATTGAGGAGCTTGAAACCCAACTGAGCAAAGAGCAAGAAGAATGTAAAAGGATAACTTCAAAGATTAAGAAGTTCATCAAAGCACACAGTCGTTATTCACGGGCACAAGAGGAACTAAAGAGGTCACAAGCTCGGCTTCAGAGGTTGGGAGATCAGCTTGCTTCTGATGCTTCAAGACCTAGTGCCAATGAAGAAGATTCAAGTGTCAATATTGTTAGTGATGGAGAACCTAATGTTGATAATGGACTGAGCCCAAGGAATGAGCTGCAGAATCATGCTTCTCCAAGCAAGAAAAGGCCGCGGATCAGCCTGGGAGCTAGTGAAGAAGCAAAACCAGTAAATTCAAGAAAAAGTCTGGTGGGAACAACTAGATTAGAGAAGCTTACTCGGTGGGATGGACCGACCACTCAATCATATAATAACTACAAGGAAGCAGAGACAGTGAACAAAATTCTGATTGGAAGCAATTGTCATAAGCCCCTAGCAAATGCGGACAAGAGTAAGCGAAGAAAGAATGGTTCTCCTAGTATTGCTTTTATAGAAAAGGTGAAGGGTTTGGAATCAGGACATGTGTTGCCTTCAACCAGCATGGCTGCTCATGCAGTTGATGAATTTATTGAAGCCATTGAAATGGAGGAGAAGACTGAGGTGGTGGAAGCTGCTACTACTGTCTTTGAGAAAGGAACTGCAAATGAGAAGGCAAGCTTCCCATATCTGCCACCCCCACCTCCACCTCCAGTGGCTCCGCAAAATGCTTACAAACAGTACGAGGGTGAGGACGAGGATGTGGATGTGGATGTGGAAGAGCTAGGTGTGATGGGAGATGTTGAAATCAATAGTGAGGTGGATATCGTGCAGCTATAA 1380 0.4572 MLERKLYKTKLCVLYQKGHCPRQSCSFAHGDAELRRFSGSFNGRRDHRGSDLRDKLDRRQSPQRRYSPGRDARDRHSFHGYSPSRSPGKRSERGQRKKQHFDGQSDVSGSLKISDGADGVKEGKVTSYGAKDVLEEQLKQVQLDIDMLDDHKCQLEIYLEERVQETDSLASRIEELETQLSKEQEECKRITSKIKKFIKAHSRYSRAQEELKRSQARLQRLGDQLASDASRPSANEEDSSVNIVSDGEPNVDNGLSPRNELQNHASPSKKRPRISLGASEEAKPVNSRKSLVGTTRLEKLTRWDGPTTQSYNNYKEAETVNKILIGSNCHKPLANADKSKRRKNGSPSIAFIEKVKGLESGHVLPSTSMAAHAVDEFIEAIEMEEKTEVVEAATTVFEKGTANEKASFPYLPPPPPPPVAPQNAYKQYEGEDEDVDVDVEELGVMGDVEINSEVDIVQL* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00616 459 Coils Coil 131 151 - -
Eupl06g00616 459 Coils Coil 159 193 - -
Eupl06g00616 459 Coils Coil 204 224 - -
Eupl06g00616 459 Gene3D - 1 36 - -
Eupl06g00616 459 MobiDBLite consensus disorder prediction 222 293 - -
Eupl06g00616 459 MobiDBLite consensus disorder prediction 226 249 - -
Eupl06g00616 459 SMART c3hfinal6 6 31 IPR000571 GO:0046872
Eupl06g00616 459 MobiDBLite consensus disorder prediction 38 80 - -
Eupl06g00616 459 SUPERFAMILY CCCH zinc finger 4 35 IPR036855 GO:0046872
Eupl06g00616 459 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Eupl06g00616 459 MobiDBLite consensus disorder prediction 38 121 - -
Eupl06g00616 459 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 441 IPR045868 GO:0046872
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Eupl06g00616 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00616 - - nnu:104604909 551.977