Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00589 ATGTCAGGAACTTTCCAAGCTAAGGATATTTATTTCTTTCCTAAAAGAGCTAAATCTAATAGTTGGGTTGTTTGGGTGTTCTTGTGTGGTGAGGCAGATCCATTCGCTGAGGCAAATGCTGAGGACTCAGGTGCAGGGTCAAAAGAGTATGTGCATGTGCGGATACAGCAGCGGAATGGTAGGAAAAGCCTGACAACAGTTCAGGGGTTGAAGAAGGAATTCAGTTACAACAAGATCCTCAAGGACCTCAAGAAGGAGTTCTGCTGCAATGGTACCGTCGTCCAGGACCCTGAGCTAGGCCAGGTTATTCAACTCCAAGGCGATCAGCGGAAGAATGTCTCCACCTTCCTTGTCCAGGCTGGCATTGTGAAGAAGGAACACATTAAGATTCATGGTTTTTGA 402 0.4627 MSGTFQAKDIYFFPKRAKSNSWVVWVFLCGEADPFAEANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKEHIKIHGF* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00589 133 Pfam Translation initiation factor SUI1 48 122 IPR001950 GO:0003743|GO:0006413
Eupl06g00589 133 NCBIfam translation initiation factor SUI1 31 133 IPR005874 GO:0003743
Eupl06g00589 133 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 32 133 - -
Eupl06g00589 133 FunFam Eukaryotic translation initiation factor SUI1 25 133 - -
Eupl06g00589 133 Gene3D - 15 133 - -
Eupl06g00589 133 SUPERFAMILY eIF1-like 30 133 IPR036877 GO:0003743|GO:0006413
Eupl06g00589 133 CDD eIF1_SUI1 49 132 IPR005874 GO:0003743
Eupl06g00589 133 ProSiteProfiles Translation initiation factor SUI1 family profile. 51 121 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00589 Eupl-Chr6 8542128 8545215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00589 33 133 Eukaryotic Initiation Factors Gene Family AT4G27130 90.099 2.13e-66 195
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00589 K03113 - ming:122090922 205.682