Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Eupl06g00581 ATGGCTACACCCCATCAACCCCTACTAGATTCTCCCAAGAGAACAACTTCCTCTTGCAAGATCCTCTACGTTGTTCTCTCTTTAGCTGCTATCATCTGCCCAACTGCTCTACTAGCTTTTCATCTGATCAACACCACCCATCAGTCTGATATCTCCGTACCTCCCCACCTATGTGAACGGGCCCACCAGCCAGCGTCATGCCTCGCCATGGTCTCCGAAGCAGTCGCCGATCAAGATATGAAATTGAGTGAAATTCATATCCTCCAGATCTTTTTAAAGAAGTATGTTTCACGTATAGACAAGGCTATTGAGGCGGTCAACGGTGTCAACAGACGTCGGATCAATGATTGGAAAGAGCAAGCAGCTTTGGCTGATTGTATGGAGCTGTTAGACTTGTCGATAGACCGAGTGATGGACTCCGTAGCGGCTATTGGAAATCAGACGGCTCGATTGCATGCTGATGCACATGCGTGGCTTAGTGCTGTACTTACCAACCATGTCACCTGCTTGGATGGTCTCCATGGGTCGGCTCGATGGGCAATGGAAGCTGAGCTTGAAGACTTGATAGCCAGGGCTCGAACCTCCCTGGCGATGCTCATCGCAACTTCACCTCCTAGTTTAGAAAAGATATGGCTGCTGAACTGGGATTTCCCGTCCTGGGTCACATACAGGGACAGGAAACTTCTAGAAGATTTGCCTAAGGATATCAAAGCTGATGTTGTGGTGGCAAAAGACGGAAGCGGGAAATACAAGACGGTTAAAGAGGCGGTTGCATCGGCACCCGATAATGGGAAGACCCGGTACGTGATCTACGTGAAGAAGGGAACGTACAAGGAGAATGTCGAGGTGGGGAAGAAGAAGAAGAACGTGATGCTCGTGGGAGATGGCATGGATTCGACTATCATTACCGGAAGCCTCAACGTCGTTGATGGATCAACAACTTTCAATTCTGCGACTGTTGCTGCTGTGGGTGACGGATTCATAGCACAAGACATCTGGTTTCAGAACACGGCTGGACCGGAGAAGCATCAAGCGGTTGCTCTACGCGTAGGGGCTGATCAATCGGTCATAAACCGCTGCCGCATTGATGCTTACCAGGATACACTTTACACTCACTCCCTCCGCCAATTCTACAGAGACTGTTCTATCACCGGTACTGTAGATTTCATCTTCGGTAACGCAGCGGTGGTGTTCCAAAACTCCAAAATCATAGCCCGAAAACCAATGAGCGGCCAAAAGAATATGGTAACTGCCCAGGGTCGGATTGATCCAAATCAAAACACGGGTACTTCAATCCAGAATTGTGAGATAACAGCCAGCTCTGACTTGGCACCAGTGAAGAGCTCATTTCCAACATATCTTGGCCGTCCATGGAAGGAATACTCTAGAACTGTTGTCATGCAATCATACATCGGAGATCATATTGATTCCGCAGGGTGGTCAGAATGGAGTGGGGATTTTGCATTGAAGACATTGTATTATGGAGAGTACTCAAATAGGGGACCGGGTGCAGGTACGAGCAAGCGAGTAAAATGGCCTGGTTATCATGTCATCACCGACTCAGCGGAAGCGAAGAAGTTCACGGTGGCGGAGCTGATTCAAGGAGGGGTGTGGTTGAAGTCTACAGGAGTGTCTTATACTGAAGGACTGTAA 1653 0.4876 MATPHQPLLDSPKRTTSSCKILYVVLSLAAIICPTALLAFHLINTTHQSDISVPPHLCERAHQPASCLAMVSEAVADQDMKLSEIHILQIFLKKYVSRIDKAIEAVNGVNRRRINDWKEQAALADCMELLDLSIDRVMDSVAAIGNQTARLHADAHAWLSAVLTNHVTCLDGLHGSARWAMEAELEDLIARARTSLAMLIATSPPSLEKIWLLNWDFPSWVTYRDRKLLEDLPKDIKADVVVAKDGSGKYKTVKEAVASAPDNGKTRYVIYVKKGTYKENVEVGKKKKNVMLVGDGMDSTIITGSLNVVDGSTTFNSATVAAVGDGFIAQDIWFQNTAGPEKHQAVALRVGADQSVINRCRIDAYQDTLYTHSLRQFYRDCSITGTVDFIFGNAAVVFQNSKIIARKPMSGQKNMVTAQGRIDPNQNTGTSIQNCEITASSDLAPVKSSFPTYLGRPWKEYSRTVVMQSYIGDHIDSAGWSEWSGDFALKTLYYGEYSNRGPGAGTSKRVKWPGYHVITDSAEAKKFTVAELIQGGVWLKSTGVSYTEGL* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Eupl06g00581 550 Gene3D - 233 550 IPR012334 -
Eupl06g00581 550 FunFam Pectinesterase 233 550 - -
Eupl06g00581 550 CDD PMEI-like_4 64 201 - -
Eupl06g00581 550 ProSitePatterns Pectinesterase signature 2. 383 392 IPR033131 -
Eupl06g00581 550 Pfam Pectinesterase 239 535 IPR000070 GO:0030599|GO:0042545
Eupl06g00581 550 NCBIfam pectinesterase inhibitor domain 24 177 IPR006501 GO:0004857
Eupl06g00581 550 FunFam Pectinesterase 3 55 202 - -
Eupl06g00581 550 SUPERFAMILY Pectin lyase-like 237 549 IPR011050 -
Eupl06g00581 550 Pfam Plant invertase/pectin methylesterase inhibitor 57 187 IPR006501 GO:0004857
Eupl06g00581 550 PANTHER PECTINESTERASE 31 540 - -
Eupl06g00581 550 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 57 186 IPR035513 -
Eupl06g00581 550 SMART PMEI_2 46 198 IPR006501 GO:0004857
Eupl06g00581 550 ProSitePatterns Pectinesterase signature 1. 264 283 IPR018040 -
Eupl06g00581 550 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 202 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Eupl06g00581 Eupl-Chr6 8420432 8423700 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Eupl06g00581 1 550 Carbohydrate Esterase AT1G11580 58.571 0.0 654
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Eupl06g00581 K01051 - nnu:104604877 796.193